RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 GNAI1P63096 354 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
LINC00963-217ENST00000624009 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 SBF1O95248 1867 aa16.22■□□□□ 0.19
LINC00963-217ENST00000624009 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 CCDC184Q52MB2 194 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 LRP10Q7Z4F1 713 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 ZNF784Q8NCA9 323 aaPredicted RBP16.21■□□□□ 0.19
LINC00963-217ENST00000624009 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 ADCY9O60503 1353 aa16.21■□□□□ 0.19
LINC00963-217ENST00000624009 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
LINC00963-217ENST00000624009 H0YIN7 160 aa16.2■□□□□ 0.18
LINC00963-217ENST00000624009 ST5P78524 1137 aa16.2■□□□□ 0.18
LINC00963-217ENST00000624009 PDIA6Q15084 440 aa16.2■□□□□ 0.18
LINC00963-217ENST00000624009 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
LINC00963-217ENST00000624009 ANKRD36CQ5JPF3 1778 aa16.19■□□□□ 0.18
LINC00963-217ENST00000624009 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
LINC00963-217ENST00000624009 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
LINC00963-217ENST00000624009 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00963-217ENST00000624009 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00963-217ENST00000624009 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
LINC00963-217ENST00000624009 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
LINC00963-217ENST00000624009 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
LINC00963-217ENST00000624009 CHRNA5P30532 468 aa16.18■□□□□ 0.18
LINC00963-217ENST00000624009 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
LINC00963-217ENST00000624009 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
LINC00963-217ENST00000624009 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
LINC00963-217ENST00000624009 HLFQ16534 295 aa16.17■□□□□ 0.18
LINC00963-217ENST00000624009 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
LINC00963-217ENST00000624009 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
LINC00963-217ENST00000624009 IL16Q14005 1332 aa16.17■□□□□ 0.18
LINC00963-217ENST00000624009 NPHP1O15259 732 aa16.16■□□□□ 0.18
LINC00963-217ENST00000624009 MYL6BP14649 208 aa16.16■□□□□ 0.18
LINC00963-217ENST00000624009 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
LINC00963-217ENST00000624009 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
LINC00963-217ENST00000624009 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
LINC00963-217ENST00000624009 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
LINC00963-217ENST00000624009 FER1L6Q2WGJ9 1857 aa16.16■□□□□ 0.18
LINC00963-217ENST00000624009 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
LINC00963-217ENST00000624009 SRGNP10124 158 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 CCDC88AQ3V6T2 1871 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 HSP90AB3PQ58FF7 597 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 CNKSR1Q969H4 720 aa16.15■□□□□ 0.18
LINC00963-217ENST00000624009 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
LINC00963-217ENST00000624009 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 HYPKQ9NX55 129 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 SLX4Q8IY92 1834 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
LINC00963-217ENST00000624009 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
LINC00963-217ENST00000624009 PROSER3Q2NL68 480 aa16.13■□□□□ 0.17
LINC00963-217ENST00000624009 ARHGAP27Q6ZUM4 889 aa16.13■□□□□ 0.17
LINC00963-217ENST00000624009 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
LINC00963-217ENST00000624009 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
LINC00963-217ENST00000624009 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
LINC00963-217ENST00000624009 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
LINC00963-217ENST00000624009 NPR1P16066 1061 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 CRY2Q49AN0 593 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 WDR63Q8IWG1 891 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
LINC00963-217ENST00000624009 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-217ENST00000624009 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
LINC00963-217ENST00000624009 NTSR2O95665 410 aa16.09■□□□□ 0.17
LINC00963-217ENST00000624009 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
LINC00963-217ENST00000624009 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
LINC00963-217ENST00000624009 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00963-217ENST00000624009 LTBP3Q9NS15 1303 aa16.09■□□□□ 0.17
LINC00963-217ENST00000624009 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.17
LINC00963-217ENST00000624009 ANXA1P04083 346 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 LMNB1P20700 586 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
LINC00963-217ENST00000624009 HOXA10P31260 410 aaPredicted RBP16.07■□□□□ 0.16
LINC00963-217ENST00000624009 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
LINC00963-217ENST00000624009 C9orf131Q5VYM1 1079 aa16.07■□□□□ 0.16
LINC00963-217ENST00000624009 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
LINC00963-217ENST00000624009 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
LINC00963-217ENST00000624009 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
LINC00963-217ENST00000624009 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
LINC00963-217ENST00000624009 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
LINC00963-217ENST00000624009 ABCC12Q96J65 1359 aa16.07■□□□□ 0.16
LINC00963-217ENST00000624009 GPTP24298 496 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms