RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 LRP6O75581 1613 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 TTC22Q5TAA0 569 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 SUCLG2Q96I99 432 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 SALL3Q9BXA9 1300 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 TTLL7Q6ZT98 887 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 FAM43AQ8N2R8 423 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 LRRCC1Q9C099 1032 aa22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 AFDNP55196 1824 aaKnown RBP22.84■■□□□ 1.25
PCDHB2-202ENST00000622947 ERBB4Q15303 1308 aa22.83■■□□□ 1.25
PCDHB2-202ENST00000622947 MTX1Q13505 466 aa22.83■■□□□ 1.25
PCDHB2-202ENST00000622947 TBC1D32Q96NH3 1257 aa22.83■■□□□ 1.25
PCDHB2-202ENST00000622947 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 GCKRQ14397 625 aa22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 MFAP1P55081 439 aaKnown RBP22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 SLC4A9Q96Q91 983 aa22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
PCDHB2-202ENST00000622947 SURF6O75683 361 aaKnown RBP22.81■■□□□ 1.24
PCDHB2-202ENST00000622947 NEXNQ0ZGT2 675 aa22.81■■□□□ 1.24
PCDHB2-202ENST00000622947 TBC1D9Q6ZT07 1266 aa22.81■■□□□ 1.24
PCDHB2-202ENST00000622947 DNAJC10Q8IXB1 793 aa22.81■■□□□ 1.24
PCDHB2-202ENST00000622947 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
PCDHB2-202ENST00000622947 ATP5J2-PTCD1G3V325 749 aa22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 TSHZ3Q63HK5 1081 aa22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 BICC1Q9H694 974 aaKnown RBP22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 PRIM1P49642 420 aaKnown RBP22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 PDE1AP54750 535 aa22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 DDB1Q16531 1140 aa22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 CDCA7Q9BWT1 371 aaPredicted RBP22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.8■■□□□ 1.24
PCDHB2-202ENST00000622947 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
PCDHB2-202ENST00000622947 SYTL4Q96C24 671 aaPredicted RBP22.79■■□□□ 1.24
PCDHB2-202ENST00000622947 OSBPL3Q9H4L5 887 aa22.79■■□□□ 1.24
PCDHB2-202ENST00000622947 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
PCDHB2-202ENST00000622947 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
PCDHB2-202ENST00000622947 JCADQ9P266 1359 aa22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 SLC4A3P48751 1232 aa22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 EPHA10Q5JZY3 1008 aa22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 IL1RAPL2Q9NP60 686 aa22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 C8orf37Q96NL8 207 aa22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 CCDC9Q9Y3X0 531 aaKnown RBP22.78■■□□□ 1.24
PCDHB2-202ENST00000622947 SDSP20132 328 aa22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 VSIG10Q8N0Z9 540 aa22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 PA2G4Q9UQ80 394 aaKnown RBP22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 NFKBIBQ15653 356 aa22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 BARGINQ6ZT62 677 aa22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 UNC5CLQ8IV45 518 aa22.77■■□□□ 1.24
PCDHB2-202ENST00000622947 RHPN1Q8TCX5 695 aa22.76■■□□□ 1.23
PCDHB2-202ENST00000622947 UPF2Q9HAU5 1272 aaKnown RBP22.76■■□□□ 1.23
PCDHB2-202ENST00000622947 GLIPR1L2Q4G1C9 344 aa22.76■■□□□ 1.23
PCDHB2-202ENST00000622947 RAB11FIP3O75154 756 aa22.75■■□□□ 1.23
PCDHB2-202ENST00000622947 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
PCDHB2-202ENST00000622947 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
PCDHB2-202ENST00000622947 CASP7P55210 303 aa22.74■■□□□ 1.23
PCDHB2-202ENST00000622947 ACSBG1Q96GR2 724 aa22.74■■□□□ 1.23
PCDHB2-202ENST00000622947 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
PCDHB2-202ENST00000622947 CDC45O75419 566 aa22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 MX1P20591 662 aa22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 CERKQ8TCT0 537 aa22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 TJP1Q07157 1748 aa22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 UBE3BQ7Z3V4 1068 aa22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.73■■□□□ 1.23
PCDHB2-202ENST00000622947 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 KIF1BPQ96EK5 621 aa22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 STAP2Q9UGK3 403 aa22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 A0A087WZG4 1122 aa22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 FAM98CQ17RN3 349 aaKnown RBP22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 TEX13AQ9BXU3 409 aaPredicted RBP22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
PCDHB2-202ENST00000622947 CYP19A1P11511 503 aaPredicted RBP22.71■■□□□ 1.23
PCDHB2-202ENST00000622947 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.23
PCDHB2-202ENST00000622947 KLHDC4Q8TBB5 520 aa22.7■■□□□ 1.23
PCDHB2-202ENST00000622947 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.23
PCDHB2-202ENST00000622947 VPS72Q15906 364 aa22.7■■□□□ 1.22
PCDHB2-202ENST00000622947 STARD3NLO95772 234 aa22.69■■□□□ 1.22
PCDHB2-202ENST00000622947 H7C1W4 665 aa22.68■■□□□ 1.22
PCDHB2-202ENST00000622947 SASH1O94885 1247 aa22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 RABL6Q3YEC7 729 aaPredicted RBP22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 ZBTB1Q9Y2K1 713 aa22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 COL15A1P39059 1388 aa22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 KCNQ2O43526 872 aa22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 RBM25P49756 843 aaKnown RBP22.67■■□□□ 1.22
PCDHB2-202ENST00000622947 A0A0G2JS52 829 aa22.66■■□□□ 1.22
PCDHB2-202ENST00000622947 CWC25Q9NXE8 425 aaPredicted RBP22.66■■□□□ 1.22
PCDHB2-202ENST00000622947 RFX5P48382 616 aaPredicted RBP22.66■■□□□ 1.22
PCDHB2-202ENST00000622947 OS9Q13438 667 aaPredicted RBP22.66■■□□□ 1.22
PCDHB2-202ENST00000622947 PI4K2BQ8TCG2 481 aa22.66■■□□□ 1.22
PCDHB2-202ENST00000622947 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 SIL1Q9H173 461 aa22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 HSPA1LP34931 641 aa22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 FOXO4P98177 505 aa22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
PCDHB2-202ENST00000622947 TCIRG1Q13488 830 aa22.64■■□□□ 1.21
PCDHB2-202ENST00000622947 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.21
PCDHB2-202ENST00000622947 HLFQ16534 295 aa22.63■■□□□ 1.21
PCDHB2-202ENST00000622947 KIF2CQ99661 725 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms