RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TMX3Q96JJ7 454 aa14.91□□□□□ -0.02
LITAF-221ENST00000622633 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
LITAF-221ENST00000622633 CHMLP26374 656 aa14.9□□□□□ -0.02
LITAF-221ENST00000622633 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
LITAF-221ENST00000622633 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
LITAF-221ENST00000622633 ZSCAN23Q3MJ62 389 aa14.9□□□□□ -0.02
LITAF-221ENST00000622633 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
LITAF-221ENST00000622633 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
LITAF-221ENST00000622633 IL1RAPL2Q9NP60 686 aa14.89□□□□□ -0.03
LITAF-221ENST00000622633 ANO2Q9NQ90 1003 aa14.89□□□□□ -0.03
LITAF-221ENST00000622633 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
LITAF-221ENST00000622633 ABTB2Q8N961 1025 aa14.89□□□□□ -0.03
LITAF-221ENST00000622633 MYCBPQ99417 103 aaPredicted RBP14.89□□□□□ -0.03
LITAF-221ENST00000622633 PHAXQ9H814 394 aaKnown RBP14.89□□□□□ -0.03
LITAF-221ENST00000622633 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
LITAF-221ENST00000622633 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
LITAF-221ENST00000622633 MAP3K5Q99683 1374 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 ERICH4A6NGS2 130 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 UBTFL1P0CB47 393 aaPredicted RBP14.88□□□□□ -0.03
LITAF-221ENST00000622633 GPT2Q8TD30 523 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 NCAPGQ9BPX3 1015 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 STAP2Q9UGK3 403 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 RSPH14Q9UHP6 348 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 TNNT3P45378 269 aaPredicted RBP14.88□□□□□ -0.03
LITAF-221ENST00000622633 HDGFL1Q5TGJ6 251 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 CTNNA3Q9UI47 895 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
LITAF-221ENST00000622633 MCCP23508 829 aa14.87□□□□□ -0.03
LITAF-221ENST00000622633 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
LITAF-221ENST00000622633 NUTM1Q86Y26 1132 aa14.87□□□□□ -0.03
LITAF-221ENST00000622633 DDX41Q9UJV9 622 aaKnown RBP14.87□□□□□ -0.03
LITAF-221ENST00000622633 RGPD8O14715 1765 aaPredicted RBP14.87□□□□□ -0.03
LITAF-221ENST00000622633 DHX16O60231 1041 aaKnown RBP14.87□□□□□ -0.03
LITAF-221ENST00000622633 KCNA6P17658 529 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
LITAF-221ENST00000622633 PRIM1P49642 420 aaKnown RBP14.86□□□□□ -0.03
LITAF-221ENST00000622633 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■□□□□ 11
LITAF-221ENST00000622633 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 PIK3C2AO00443 1686 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 MAP4K4O95819 1239 aaPredicted RBP14.86□□□□□ -0.03
LITAF-221ENST00000622633 SRCIN1Q9C0H9 1055 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 CEP83Q9Y592 693 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 MORC2Q9Y6X9 1032 aaPredicted RBP14.86□□□□□ -0.03
LITAF-221ENST00000622633 KIF13AQ9H1H9 1805 aa14.86□□□□□ -0.03
LITAF-221ENST00000622633 SURF6O75683 361 aaKnown RBP14.85□□□□□ -0.03
LITAF-221ENST00000622633 MCM2P49736 904 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 PPP1R42Q7Z4L9 355 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 UPF3BQ9BZI7 483 aaKnown RBP14.85□□□□□ -0.03
LITAF-221ENST00000622633 IL25Q9H293 177 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
LITAF-221ENST00000622633 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
LITAF-221ENST00000622633 RAD51AP2Q09MP3 1159 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 CUL4AQ13619 759 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 TICAM2Q86XR7 235 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
LITAF-221ENST00000622633 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
LITAF-221ENST00000622633 TMX1Q9H3N1 280 aa14.84□□□□□ -0.03
LITAF-221ENST00000622633 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
LITAF-221ENST00000622633 NWD1Q149M9 1564 aa14.84□□□□□ -0.03
LITAF-221ENST00000622633 ANAPC15P60006 121 aa14.84□□□□□ -0.03
LITAF-221ENST00000622633 LGR6Q9HBX8 967 aa14.84□□□□□ -0.03
LITAF-221ENST00000622633 SOS1Q07889 1333 aaPredicted RBP14.83□□□□□ -0.04
LITAF-221ENST00000622633 IRF6O14896 467 aa14.83□□□□□ -0.04
LITAF-221ENST00000622633 HNRNPH2P55795 449 aaKnown RBP14.83□□□□□ -0.04
LITAF-221ENST00000622633 CEP120Q8N960 986 aa14.83□□□□□ -0.04
LITAF-221ENST00000622633 TMEM63CQ9P1W3 806 aa14.83□□□□□ -0.04
LITAF-221ENST00000622633 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.04
LITAF-221ENST00000622633 BRD1O95696 1058 aa14.83□□□□□ -0.04
LITAF-221ENST00000622633 ARHGAP23Q9P227 1491 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
LITAF-221ENST00000622633 KCNQ3O43525 872 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 CCDC172P0C7W6 258 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 LRRC37A3O60309 1634 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 SLIT1O75093 1534 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 NBPF7P0C2Y1 421 aaPredicted RBP14.82□□□□□ -0.04
LITAF-221ENST00000622633 POLA2Q14181 598 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 FOXD4L6Q3SYB3 417 aaPredicted RBP14.82□□□□□ -0.04
LITAF-221ENST00000622633 ICE2Q659A1 982 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 FOXD4L3Q6VB84 417 aaPredicted RBP14.82□□□□□ -0.04
LITAF-221ENST00000622633 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
LITAF-221ENST00000622633 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
LITAF-221ENST00000622633 EIF4A1P60842 406 aaKnown RBP14.81□□□□□ -0.04
LITAF-221ENST00000622633 NBPF6Q5VWK0 638 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 NBPF4Q96M43 638 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.81□□□□□ -0.04
LITAF-221ENST00000622633 AOX1Q06278 1338 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 SYCE3A1L190 88 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 ANXA1P04083 346 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 RBM33Q96EV2 1170 aaKnown RBP14.81□□□□□ -0.04
LITAF-221ENST00000622633 SPTLC3Q9NUV7 552 aa14.81□□□□□ -0.04
LITAF-221ENST00000622633 PI4KAP2A4QPH2 592 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 ANKARQ7Z5J8 1434 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 C17orf53Q8N3J3 647 aaPredicted RBP14.8□□□□□ -0.04
LITAF-221ENST00000622633 PI4KAP1Q8N8J0 262 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
LITAF-221ENST00000622633 INTS4Q96HW7 963 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms