RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 SLC27A5Q9Y2P5 690 aa8.31□□□□□ -1.08
DDX1-208ENST00000621973 ATP10BO94823 1461 aa8.31□□□□□ -1.08
DDX1-208ENST00000621973 PZPP20742 1482 aa8.31□□□□□ -1.08
DDX1-208ENST00000621973 WASHC2AQ641Q2 1341 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 LGR5O75473 907 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 POTEJP0CG39 1038 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 EVA1CP58658 441 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
DDX1-208ENST00000621973 Q3C1V9 767 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 CLEC4GQ6UXB4 293 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 MRS2Q9HD23 443 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 INPP5FQ9Y2H2 1132 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 ABCC10Q5T3U5 1492 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 CROCC2H7BZ55 1655 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 TEX14Q8IWB6 1497 aa8.3□□□□□ -1.08
DDX1-208ENST00000621973 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 DNAJC6O75061 913 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 FGRP09769 529 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 RACK1P63244 317 aaKnown RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 ANKRD30AQ9BXX3 1397 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 ENPP3O14638 875 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 SORBS3O60504 671 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.08
DDX1-208ENST00000621973 NBPF8Q3BBV2 869 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
DDX1-208ENST00000621973 TTF2Q9UNY4 1162 aaKnown RBP8.29□□□□□ -1.08
DDX1-208ENST00000621973 HOXB1P14653 301 aaPredicted RBP8.28□□□□□ -1.08
DDX1-208ENST00000621973 PSEN2P49810 448 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
DDX1-208ENST00000621973 KMT5BQ4FZB7 885 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
DDX1-208ENST00000621973 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 MAMSTRQ6ZN01 415 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 CCAR1Q8IX12 1150 aaKnown RBP8.28□□□□□ -1.08
DDX1-208ENST00000621973 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
DDX1-208ENST00000621973 SHANK2Q9UPX8 1470 aa8.27□□□□□ -1.08
DDX1-208ENST00000621973 TREHO43280 583 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 RNF40O75150 1001 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 DKK1O94907 266 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 LDHBP07195 334 aaKnown RBP8.27□□□□□ -1.09
DDX1-208ENST00000621973 PDGFRBP09619 1106 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 CDC42BPAQ5VT25 1732 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 SLC4A5Q9BY07 1137 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 CEP126Q9P2H0 1117 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 WWC3Q9ULE0 1092 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 KIAA1107Q9UPP5 1409 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 KIAA1024Q9UPX6 916 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 SPATA31E1Q6ZUB1 1445 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
DDX1-208ENST00000621973 STK10O94804 968 aaKnown RBP8.27□□□□□ -1.09
DDX1-208ENST00000621973 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
DDX1-208ENST00000621973 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.09
DDX1-208ENST00000621973 MAP10Q9P2G4 905 aa8.27□□□□□ -1.09
DDX1-208ENST00000621973 CCDC7Q96M83 1385 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 PTPRGP23470 1445 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 CNTLNQ9NXG0 1405 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 PRC1O43663 620 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 DAB2P98082 770 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 ODR4Q5SWX8 454 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 IER2Q9BTL4 223 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
DDX1-208ENST00000621973 ANKRD50Q9ULJ7 1429 aa8.26□□□□□ -1.09
DDX1-208ENST00000621973 CCDC189A1A4V9 331 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
DDX1-208ENST00000621973 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
DDX1-208ENST00000621973 MAPK8P45983 427 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 RAVER1Q8IY67 606 aaKnown RBP8.25□□□□□ -1.09
DDX1-208ENST00000621973 PLPP7Q8NBV4 271 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 MRFAP1L1Q96HT8 127 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 USB1Q9BQ65 265 aaKnown RBP8.25□□□□□ -1.09
DDX1-208ENST00000621973 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
DDX1-208ENST00000621973 MAP9Q49MG5 647 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
DDX1-208ENST00000621973 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 ARHGEF5Q12774 1597 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 HMGB1P1B2RPK0 211 aaPredicted RBP8.24□□□□□ -1.09
DDX1-208ENST00000621973 KIF4AO95239 1232 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 RBCK1Q9BYM8 510 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
DDX1-208ENST00000621973 WDHD1O75717 1129 aaPredicted RBP8.24□□□□□ -1.09
DDX1-208ENST00000621973 TSPY4P0CV99 314 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 TSPY10P0CW01 314 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 PDE6BP35913 854 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 SERINC3Q13530 473 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 KRBA2Q6ZNG9 492 aa8.24□□□□□ -1.09
DDX1-208ENST00000621973 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms