RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
TRA2A-212ENST00000621813 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
TRA2A-212ENST00000621813 KDM6AO15550 1401 aaPredicted RBP21.3■■□□□ 1
TRA2A-212ENST00000621813 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
TRA2A-212ENST00000621813 HSP90AB4PQ58FF6 505 aa21.3■■□□□ 1
TRA2A-212ENST00000621813 KSR2Q6VAB6 950 aa21.3■■□□□ 1
TRA2A-212ENST00000621813 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
TRA2A-212ENST00000621813 ZNF830Q96NB3 372 aaPredicted RBP21.3■■□□□ 1
TRA2A-212ENST00000621813 CIZ1Q9ULV3 898 aaPredicted RBP21.3■■□□□ 1
TRA2A-212ENST00000621813 PARP4Q9UKK3 1724 aaKnown RBP21.3■■□□□ 1
TRA2A-212ENST00000621813 ERC2O15083 957 aa21.29■■□□□ 1
TRA2A-212ENST00000621813 DDX58O95786 925 aaKnown RBP21.29■■□□□ 1
TRA2A-212ENST00000621813 PPP1R42Q7Z4L9 355 aa21.29■■□□□ 1
TRA2A-212ENST00000621813 K7ELQ4 463 aaPredicted RBP21.29■■□□□ 1
TRA2A-212ENST00000621813 ZNF790Q6PG37 636 aa21.29■■□□□ 1
TRA2A-212ENST00000621813 SPRYD3Q8NCJ5 442 aa21.29■■□□□ 1
TRA2A-212ENST00000621813 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
TRA2A-212ENST00000621813 C5P01031 1676 aa21.29■■□□□ 1
TRA2A-212ENST00000621813 MCM5P33992 734 aa21.28■■□□□ 1
TRA2A-212ENST00000621813 SASS6Q6UVJ0 657 aa21.28■■□□□ 1
TRA2A-212ENST00000621813 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
TRA2A-212ENST00000621813 DDIT3P35638 169 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 SLC20A2Q08357 652 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 MTX1Q13505 466 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 SRGAP3O43295 1099 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 DCAF5Q96JK2 942 aa21.27■■□□□ 1
TRA2A-212ENST00000621813 SURF6O75683 361 aaKnown RBP21.26■□□□□ 0.99
TRA2A-212ENST00000621813 ANXA1P04083 346 aa21.26■□□□□ 0.99
TRA2A-212ENST00000621813 KIF1BPQ96EK5 621 aa21.26■□□□□ 0.99
TRA2A-212ENST00000621813 AK9Q5TCS8 1911 aa21.26■□□□□ 0.99
TRA2A-212ENST00000621813 CABLES1Q8TDN4 633 aa21.25■□□□□ 0.99
TRA2A-212ENST00000621813 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
TRA2A-212ENST00000621813 LINS1Q8NG48 757 aa21.24■□□□□ 0.99
TRA2A-212ENST00000621813 C9orf78Q9NZ63 289 aaPredicted RBP21.24■□□□□ 0.99
TRA2A-212ENST00000621813 PROSER3Q2NL68 480 aa21.23■□□□□ 0.99
TRA2A-212ENST00000621813 RHPN1Q8TCX5 695 aa21.23■□□□□ 0.99
TRA2A-212ENST00000621813 CHRNA2Q15822 529 aa21.23■□□□□ 0.99
TRA2A-212ENST00000621813 NFATC2IPQ8NCF5 419 aa21.22■□□□□ 0.99
TRA2A-212ENST00000621813 LAMB4A4D0S4 1761 aa21.22■□□□□ 0.99
TRA2A-212ENST00000621813 UTYO14607 1347 aa21.22■□□□□ 0.99
TRA2A-212ENST00000621813 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
TRA2A-212ENST00000621813 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
TRA2A-212ENST00000621813 EPB41L2O43491 1005 aaKnown RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 ZFP91Q96JP5 570 aaPredicted RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 NOL7Q9UMY1 257 aaKnown RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 CD2BP2O95400 341 aaKnown RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 PDIA6Q15084 440 aa21.21■□□□□ 0.99
TRA2A-212ENST00000621813 DNTTIP2Q5QJE6 756 aaKnown RBP21.21■□□□□ 0.99
TRA2A-212ENST00000621813 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
TRA2A-212ENST00000621813 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.99
TRA2A-212ENST00000621813 TRIM6-TRIM34B2RNG4 842 aa21.2■□□□□ 0.98
TRA2A-212ENST00000621813 ST18O60284 1047 aa21.2■□□□□ 0.98
TRA2A-212ENST00000621813 ESYT1Q9BSJ8 1104 aa21.2■□□□□ 0.98
TRA2A-212ENST00000621813 ABCA3Q99758 1704 aa21.2■□□□□ 0.98
TRA2A-212ENST00000621813 CYP27B1O15528 508 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
TRA2A-212ENST00000621813 ERC1Q8IUD2 1116 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 IL1RAPL2Q9NP60 686 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 GRM8O00222 908 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
TRA2A-212ENST00000621813 SLC39A6Q13433 755 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 WDR17Q8IZU2 1322 aa21.19■□□□□ 0.98
TRA2A-212ENST00000621813 MCCP23508 829 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 CHMLP26374 656 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 NEXNQ0ZGT2 675 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 TSHZ3Q63HK5 1081 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 RILPL2Q969X0 211 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 FMNL2Q96PY5 1086 aa21.18■□□□□ 0.98
TRA2A-212ENST00000621813 USP42Q9H9J4 1324 aaKnown RBP21.18■□□□□ 0.98
TRA2A-212ENST00000621813 NASPP49321 788 aaPredicted RBP21.17■□□□□ 0.98
TRA2A-212ENST00000621813 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
TRA2A-212ENST00000621813 IRX3P78415 501 aaPredicted RBP21.17■□□□□ 0.98
TRA2A-212ENST00000621813 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
TRA2A-212ENST00000621813 ZNF496Q96IT1 587 aaPredicted RBP21.17■□□□□ 0.98
TRA2A-212ENST00000621813 SLAIN2Q9P270 581 aa21.17■□□□□ 0.98
TRA2A-212ENST00000621813 RAB3GAP1Q15042 981 aa21.16■□□□□ 0.98
TRA2A-212ENST00000621813 CWF19L2Q2TBE0 894 aaKnown RBP21.16■□□□□ 0.98
TRA2A-212ENST00000621813 DNAJC2Q99543 621 aaKnown RBP21.16■□□□□ 0.98
TRA2A-212ENST00000621813 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
TRA2A-212ENST00000621813 CABP4P57796 275 aa21.16■□□□□ 0.98
TRA2A-212ENST00000621813 ANAPC15P60006 121 aa21.16■□□□□ 0.98
TRA2A-212ENST00000621813 OS9Q13438 667 aaPredicted RBP21.16■□□□□ 0.98
TRA2A-212ENST00000621813 PCDH11XQ9BZA7 1347 aa21.15■□□□□ 0.98
TRA2A-212ENST00000621813 PCDH11YQ9BZA8 1340 aa21.15■□□□□ 0.98
TRA2A-212ENST00000621813 COL5A2P05997 1499 aaPredicted RBP21.15■□□□□ 0.98
TRA2A-212ENST00000621813 AIMP1Q12904 312 aaKnown RBP21.15■□□□□ 0.98
TRA2A-212ENST00000621813 NUTM1Q86Y26 1132 aa21.15■□□□□ 0.98
TRA2A-212ENST00000621813 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
TRA2A-212ENST00000621813 PI4K2BQ8TCG2 481 aa21.15■□□□□ 0.98
TRA2A-212ENST00000621813 GBP4Q96PP9 640 aa21.15■□□□□ 0.98
TRA2A-212ENST00000621813 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.97
TRA2A-212ENST00000621813 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
TRA2A-212ENST00000621813 UBR2Q8IWV8 1755 aa21.13■□□□□ 0.97
TRA2A-212ENST00000621813 AFDNP55196 1824 aaKnown RBP21.13■□□□□ 0.97
TRA2A-212ENST00000621813 ARFGEF2Q9Y6D5 1785 aa21.13■□□□□ 0.97
TRA2A-212ENST00000621813 IL17RAQ96F46 866 aa21.13■□□□□ 0.97
TRA2A-212ENST00000621813 GPATCH3Q96I76 525 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms