RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 INTS4Q96HW7 963 aaKnown RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 KAZALD1Q96I82 304 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 SRCIN1Q9C0H9 1055 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 CWC22Q9HCG8 908 aaKnown RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 SNRKQ9NRH2 765 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 TMEM63CQ9P1W3 806 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 RBM27Q9P2N5 1060 aaKnown RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 SNX14Q9Y5W7 946 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.95□□□□□ -1.78
U1.39-201ENST00000621562 DOT1LQ8TEK3 1739 aa3.95□□□□□ -1.78
U1.39-201ENST00000621562 PI4KAP2A4QPH2 592 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 ESPNB1AK53 854 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 ALDH1L1O75891 902 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 LARGE1O95461 756 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 NEK4P51957 841 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 CCDC173Q0VFZ6 552 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 COL9A3Q14050 684 aaPredicted RBP3.94□□□□□ -1.78
U1.39-201ENST00000621562 MCTP1Q6DN14 999 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 CASC1Q6TDU7 716 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 NUTM1Q86Y26 1132 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 RASEFQ8IZ41 740 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 PI4KAP1Q8N8J0 262 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 LTV1Q96GA3 475 aaPredicted RBP3.94□□□□□ -1.78
U1.39-201ENST00000621562 ARXQ96QS3 562 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 RBSNQ9H1K0 784 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 IL1RAPL2Q9NP60 686 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.94□□□□□ -1.78
U1.39-201ENST00000621562 DDX49Q9Y6V7 483 aaKnown RBP3.94□□□□□ -1.78
U1.39-201ENST00000621562 COL5A3P25940 1745 aaPredicted RBP3.94□□□□□ -1.78
U1.39-201ENST00000621562 NRAPQ86VF7 1730 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 LRP6O75581 1613 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 TAF1P21675 1872 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 CDK5RAP2Q96SN8 1893 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 TNS2Q63HR2 1409 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 TNS3Q68CZ2 1445 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 ERBB3P21860 1342 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 TTC41PQ6P2S7 1318 aa3.94□□□□□ -1.78
U1.39-201ENST00000621562 BAZ2AQ9UIF9 1905 aaKnown RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 TIAM2Q8IVF5 1701 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 KIAA1551Q9HCM1 1747 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 TMEM94Q12767 1356 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 RFX7Q2KHR2 1363 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 COL16A1Q07092 1604 aaPredicted RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 PRAMEF22A3QJZ6 481 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 GOLGA6L22H0YM25 854 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 GIGYF1O75420 1035 aaPredicted RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 SASH1O94885 1247 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 HSP90AA1P07900 732 aaKnown RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 MCM2P49736 904 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 PTH1RQ03431 593 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 CAVIN1Q6NZI2 390 aaKnown RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 PLPPR3Q6T4P5 718 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 LRSAM1Q6UWE0 723 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 KSR2Q6VAB6 950 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 MPRIPQ6WCQ1 1025 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 RUFY3Q7L099 469 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 KCNH5Q8NCM2 988 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 ANKRD24Q8TF21 1146 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 KIF1BPQ96EK5 621 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 SUCLG2Q96I99 432 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 ORAI2Q96SN7 254 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 UPF3BQ9BZI7 483 aaKnown RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 ANO2Q9NQ90 1003 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 PA2G4Q9UQ80 394 aaKnown RBP3.93□□□□□ -1.78
U1.39-201ENST00000621562 AXIN2Q9Y2T1 843 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 LAMB1P07942 1786 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 SCN7AQ01118 1682 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 MYH8P13535 1937 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 CCDC171Q6TFL3 1326 aa3.93□□□□□ -1.78
U1.39-201ENST00000621562 CPDO75976 1380 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 BTBD11A6QL63 1104 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 TRIM6-TRIM34B2RNG4 842 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 SRGAP3O43295 1099 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 GADD45BO75293 160 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 SURF6O75683 361 aaKnown RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 MAP4K4O95819 1239 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 MBD3O95983 291 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 GCP02774 474 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 IGKV5-2P06315 115 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 EIF2S2P20042 333 aaKnown RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 MCCP23508 829 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 RFX5P48382 616 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 NASPP49321 788 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 PRIM1P49642 420 aaKnown RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 AK2P54819 239 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 AMOTQ4VCS5 1084 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 PLEKHO1Q53GL0 409 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 HS1BP3Q53T59 392 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 ANKLE2Q86XL3 938 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 RILPL2Q969X0 211 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 RBM33Q96EV2 1170 aaKnown RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 TM6SF1Q9BZW5 370 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 DDX21Q9NR30 783 aaKnown RBP eCLIP3.92□□□□□ -1.78
U1.39-201ENST00000621562 TLR7Q9NYK1 1049 aaKnown RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 DBF4Q9UBU7 674 aaPredicted RBP3.92□□□□□ -1.78
U1.39-201ENST00000621562 MAP3K2Q9Y2U5 619 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 SBF2Q86WG5 1849 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 ZNF609O15014 1411 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 NPHP3Q7Z494 1330 aa3.92□□□□□ -1.78
U1.39-201ENST00000621562 COL14A1Q05707 1796 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms