RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 UBASH3AP57075 661 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC178Q5BJE1 867 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 MCM6Q14566 821 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 LRP2BPQ9P2M1 347 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 RSPH14Q9UHP6 348 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 TDRD12Q587J7 1177 aaKnown RBP12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 KANK3Q6NY19 840 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 TSG101Q99816 390 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 DACT1Q9NYF0 836 aa12.3□□□□□ -0.44
CLTCL1-209ENST00000617103 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 ZNF213O14771 459 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 DNA2P51530 1060 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 FLIIQ13045 1269 aa12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
CLTCL1-209ENST00000617103 F13A1P00488 732 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 NAPBQ9H115 298 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC141Q6ZP82 1450 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 CKAP4Q07065 602 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 JADE2Q9NQC1 790 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 V9GYY5 206 aaPredicted RBP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 CAPN2P17655 700 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 LIG1P18858 919 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 MAATS1Q7Z4T9 603 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 KIF20AO95235 890 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
CLTCL1-209ENST00000617103 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 TYRO3Q06418 890 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 HSF2BPO75031 334 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 TERF1P54274 439 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 TUBB4BP68371 445 aa12.27□□□□□ -0.44
CLTCL1-209ENST00000617103 IGSF3O75054 1194 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 PDE1AP54750 535 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 CTCFLQ8NI51 663 aaPredicted RBP12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 N4BP3O15049 544 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 IARSP41252 1262 aaKnown RBP12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 SYKP43405 635 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 METTL24Q5JXM2 366 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 CEP112Q8N8E3 955 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 NECAB1Q8N987 351 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 NUDT16Q96DE0 195 aaKnown RBP12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
CLTCL1-209ENST00000617103 HSPA4P34932 840 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 DNM1Q05193 864 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 PYM1Q9BRP8 204 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 NSD2O96028 1365 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 PTGS1P23219 599 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 NF2P35240 595 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 KCNG4Q8TDN1 519 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 MRPS27Q92552 414 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 GOLGA1Q92805 767 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 SYT1P21579 422 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 SSR1P43307 286 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 RAB34Q9BZG1 259 aa12.26□□□□□ -0.45
CLTCL1-209ENST00000617103 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 SEC24BO95487 1268 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 MATR3P43243 847 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 PPP1R42Q7Z4L9 355 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 ABCC5O15440 1437 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 EBAG9O00559 213 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
CLTCL1-209ENST00000617103 BRF1Q92994 677 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms