RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	LARGE1	O95461	756 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	LRRC8A	Q8IWT6	810 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	ZCCHC17	Q9NP64	241 aa	Known RBP	18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	CD109	Q6YHK3	1445 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	CCDC144B	Q3MJ40	725 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	CCDC144CP	Q8IYA2	1237 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	CHMP4C	Q96CF2	233 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	CFAP100	Q494V2	611 aa		18.32	■□□□□ 0.52
SYNRG-223	ENST00000616179	GYS2	P54840	703 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	LRRC2	Q9BYS8	371 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	ANO10	Q9NW15	660 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	IFT140	Q96RY7	1462 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179		A0A1W2PP64	1363 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	KIAA0556	O60303	1618 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	STX1A	Q16623	288 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	LARP1	Q6PKG0	1096 aa	Known RBP	18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	CARD6	Q9BX69	1037 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	CFAP45	Q9UL16	551 aa		18.31	■□□□□ 0.52
SYNRG-223	ENST00000616179	FSIP1	Q8NA03	581 aa		18.3	■□□□□ 0.52
SYNRG-223	ENST00000616179	ZSCAN26	Q16670	478 aa		18.3	■□□□□ 0.52
SYNRG-223	ENST00000616179	HSPA4	P34932	840 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	PPP1R42	Q7Z4L9	355 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	DRC1	Q96MC2	740 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	NPHP3	Q7Z494	1330 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	OAS2	P29728	719 aa	Known RBP	18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	GNG11	P61952	73 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	STK38	Q15208	465 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	CAPN2	P17655	700 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	AMPH	P49418	695 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	WAPL	Q7Z5K2	1190 aa		18.29	■□□□□ 0.52
SYNRG-223	ENST00000616179	RAD51AP2	Q09MP3	1159 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	IFNK	Q9P0W0	207 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	LMOD1	P29536	600 aa	Predicted RBP	18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	CCDC30	Q5VVM6	783 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	ARFGAP3	Q9NP61	516 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	CLCN6	P51797	869 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	AACS	Q86V21	672 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	VPS18	Q9P253	973 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	RTL1	A6NKG5	1358 aa		18.28	■□□□□ 0.52
SYNRG-223	ENST00000616179	ANKRD65	E5RJM6	399 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	EVC	P57679	992 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	FLII	Q13045	1269 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	ME3	Q16798	604 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	NSD2	O96028	1365 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	GSDMD	P57764	484 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	BOLA2	Q9H3K6	86 aa		18.27	■□□□□ 0.52
SYNRG-223	ENST00000616179	PTPRC	P08575	1304 aa		18.27	■□□□□ 0.51
SYNRG-223	ENST00000616179	RHPN1	Q8TCX5	695 aa		18.27	■□□□□ 0.51
SYNRG-223	ENST00000616179	LEO1	Q8WVC0	666 aa	Predicted RBP	18.27	■□□□□ 0.51
SYNRG-223	ENST00000616179	EPC1	Q9H2F5	836 aa		18.27	■□□□□ 0.51
SYNRG-223	ENST00000616179	FAM193A	P78312	1265 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	CCT2	P78371	535 aa	Known RBP	18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	BRF1	Q92994	677 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	ADCK5	Q3MIX3	580 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	CLSTN2	Q9H4D0	955 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	ERCC6	Q03468	1493 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	GRIN2A	Q12879	1464 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	NPM1	P06748	294 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	KIF1BP	Q96EK5	621 aa		18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	RBM8A	Q9Y5S9	174 aa	Known RBP	18.26	■□□□□ 0.51
SYNRG-223	ENST00000616179	PTPN21	Q16825	1174 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	RGS12	O14924	1447 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	TRIM66	O15016	1216 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	CASQ1	P31415	396 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	HDGFL1	Q5TGJ6	251 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	SYNE3	Q6ZMZ3	975 aa		18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	RNF216	Q9NWF9	866 aa	Predicted RBP	18.25	■□□□□ 0.51
SYNRG-223	ENST00000616179	SGSM2	O43147	1006 aa		18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	ATP8B2	P98198	1209 aa		18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	TEF	Q10587	303 aa		18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	UTP14A	Q9BVJ6	771 aa	Known RBP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	KDM5A	P29375	1690 aa	Known RBP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	ANKRD1	Q15327	319 aa		18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	DHX37	Q8IY37	1157 aa	Known RBP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	GLRX3	O76003	335 aa	Known RBP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	BRPF1	P55201	1214 aa	Predicted RBP	18.24	■□□□□ 0.51
SYNRG-223	ENST00000616179	PNMA6A	P0CW24	399 aa	Predicted RBP	18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	VIRMA	Q69YN4	1812 aa	Known RBP	18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	FOXO3	O43524	673 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	MLEC	Q14165	292 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	SMC1A	Q14683	1233 aa	Known RBP	18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179		H0YHG0	523 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	CCP110	O43303	1012 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	SYCP1	Q15431	976 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	HSP90AB4P	Q58FF6	505 aa		18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	ZNF396	Q96N95	335 aa	Predicted RBP	18.23	■□□□□ 0.51
SYNRG-223	ENST00000616179	PES1	O00541	588 aa	Known RBP	18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	JAK2	O60674	1132 aa		18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	PTH1R	Q03431	593 aa		18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	ADCY10	Q96PN6	1610 aa		18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	AIMP1	Q12904	312 aa	Known RBP	18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	ANXA1	P04083	346 aa		18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	IL25	Q9H293	177 aa		18.22	■□□□□ 0.51
SYNRG-223	ENST00000616179	POLR3D	P05423	398 aa	Predicted RBP	18.21	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms