RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
SNX9-202ENST00000614703 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
SNX9-202ENST00000614703 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
SNX9-202ENST00000614703 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
SNX9-202ENST00000614703 SRGNP10124 158 aa13.06□□□□□ -0.32
SNX9-202ENST00000614703 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
SNX9-202ENST00000614703 ABHD8Q96I13 439 aa13.06□□□□□ -0.32
SNX9-202ENST00000614703 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
SNX9-202ENST00000614703 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
SNX9-202ENST00000614703 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
SNX9-202ENST00000614703 EPHX2P34913 555 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNX9-202ENST00000614703 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
SNX9-202ENST00000614703 TEFQ10587 303 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 HEG1Q9ULI3 1381 aa13.04□□□□□ -0.32
SNX9-202ENST00000614703 NPR1P16066 1061 aa13.03□□□□□ -0.32
SNX9-202ENST00000614703 ECE1P42892 770 aa13.03□□□□□ -0.32
SNX9-202ENST00000614703 ZNF790Q6PG37 636 aa13.03□□□□□ -0.32
SNX9-202ENST00000614703 CNTROBQ8N137 903 aa13.03□□□□□ -0.32
SNX9-202ENST00000614703 ABT1Q9ULW3 272 aaKnown RBP13.03□□□□□ -0.32
SNX9-202ENST00000614703 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
SNX9-202ENST00000614703 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
SNX9-202ENST00000614703 HMOX1P09601 288 aa13.02□□□□□ -0.33
SNX9-202ENST00000614703 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX9-202ENST00000614703 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
SNX9-202ENST00000614703 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.33
SNX9-202ENST00000614703 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.33
SNX9-202ENST00000614703 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
SNX9-202ENST00000614703 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
SNX9-202ENST00000614703 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.33
SNX9-202ENST00000614703 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 ALDH1B1P30837 517 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 GPC2Q8N158 579 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 JDP2Q8WYK2 163 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
SNX9-202ENST00000614703 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
SNX9-202ENST00000614703 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
SNX9-202ENST00000614703 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
SNX9-202ENST00000614703 RGS19P49795 217 aa13□□□□□ -0.33
SNX9-202ENST00000614703 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
SNX9-202ENST00000614703 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
SNX9-202ENST00000614703 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
SNX9-202ENST00000614703 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 CCDC85CA6NKD9 419 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 FZD9O00144 591 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 RGL2O15211 777 aa12.99□□□□□ -0.33
SNX9-202ENST00000614703 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
SNX9-202ENST00000614703 MAP1SQ66K74 1059 aaPredicted RBP12.99□□□□□ -0.33
SNX9-202ENST00000614703 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX9-202ENST00000614703 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
SNX9-202ENST00000614703 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
SNX9-202ENST00000614703 CA12O43570 354 aa12.98□□□□□ -0.33
SNX9-202ENST00000614703 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
SNX9-202ENST00000614703 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
SNX9-202ENST00000614703 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
SNX9-202ENST00000614703 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
SNX9-202ENST00000614703 TRPM7Q96QT4 1865 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SNX9-202ENST00000614703 A1BGP04217 495 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 MAP2K2P36507 400 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 SYNE4Q8N205 404 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 CAPNS2Q96L46 248 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
SNX9-202ENST00000614703 PSMD1Q99460 953 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
SNX9-202ENST00000614703 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
SNX9-202ENST00000614703 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
SNX9-202ENST00000614703 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
SNX9-202ENST00000614703 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
SNX9-202ENST00000614703 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
SNX9-202ENST00000614703 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
SNX9-202ENST00000614703 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
SNX9-202ENST00000614703 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX9-202ENST00000614703 GJA3Q9Y6H8 435 aa12.94□□□□□ -0.34
SNX9-202ENST00000614703 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
SNX9-202ENST00000614703 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
SNX9-202ENST00000614703 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
SNX9-202ENST00000614703 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
SNX9-202ENST00000614703 GRM1Q13255 1194 aa12.92□□□□□ -0.34
SNX9-202ENST00000614703 CYP4F22Q6NT55 531 aa12.92□□□□□ -0.34
SNX9-202ENST00000614703 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
SNX9-202ENST00000614703 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
SNX9-202ENST00000614703 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
SNX9-202ENST00000614703 PDE4DIPQ5VU43 2346 aa12.91□□□□□ -0.34
SNX9-202ENST00000614703 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
SNX9-202ENST00000614703 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
SNX9-202ENST00000614703 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
SNX9-202ENST00000614703 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
SNX9-202ENST00000614703 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
SNX9-202ENST00000614703 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.34
SNX9-202ENST00000614703 VPS33BQ9H267 617 aa12.9□□□□□ -0.34
SNX9-202ENST00000614703 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
SNX9-202ENST00000614703 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
SNX9-202ENST00000614703 SCNN1DP51172 638 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms