RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 STIM2Q9P246 746 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.126e-7■■■□□ 14.7
CHD1-212ENST00000614616 TUBB2AQ13885 445 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 SMC5Q8IY18 1101 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 TUBB2BQ9BVA1 445 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 FEZ2Q9UHY8 353 aaPredicted RBP15.81■□□□□ 0.12
CHD1-212ENST00000614616 KLHL10Q6JEL2 608 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 ARFGAP2Q8N6H7 521 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 PTGS1P23219 599 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 PCK1P35558 622 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
CHD1-212ENST00000614616 FSD2A1L4K1 749 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 CCDC57Q2TAC2 916 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 NCOA1Q15788 1441 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 SAMD15Q9P1V8 674 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 RLBP1P12271 317 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 SPATS2LQ9NUQ6 558 aaKnown RBP15.8■□□□□ 0.12
CHD1-212ENST00000614616 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 GJB2P29033 226 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 CCDC38Q502W7 563 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 GOLGA5Q8TBA6 731 aa15.8■□□□□ 0.12
CHD1-212ENST00000614616 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 WHAMMP3Q1A5X7 153 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 LTV1Q96GA3 475 aaPredicted RBP15.79■□□□□ 0.12
CHD1-212ENST00000614616 NOL3O60936 208 aaKnown RBP15.79■□□□□ 0.12
CHD1-212ENST00000614616 PPP2R3AQ06190 1150 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 CACNA2D3Q8IZS8 1091 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
CHD1-212ENST00000614616 ZNF445P59923 1031 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 CTNNA3Q9UI47 895 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 TSNAXIP1Q2TAA8 658 aa15.79■□□□□ 0.12
CHD1-212ENST00000614616 TYRO3Q06418 890 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 RPAP2Q8IXW5 612 aaPredicted RBP15.78■□□□□ 0.12
CHD1-212ENST00000614616 SELENOOQ9BVL4 669 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 SPATS2Q86XZ4 545 aaKnown RBP15.78■□□□□ 0.12
CHD1-212ENST00000614616 TRIM7Q9C029 511 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 EVCP57679 992 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 GGT6Q6P531 493 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHD1-212ENST00000614616 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
CHD1-212ENST00000614616 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
CHD1-212ENST00000614616 TCHHQ07283 1943 aa15.78■□□□□ 0.12
CHD1-212ENST00000614616 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.12
CHD1-212ENST00000614616 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.12
CHD1-212ENST00000614616 C8orf76Q96K31 380 aa15.77■□□□□ 0.12
CHD1-212ENST00000614616 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
CHD1-212ENST00000614616 MAP3K9P80192 1104 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 TSG101Q99816 390 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 GOLGA6CA6NDK9 693 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 TACC1O75410 805 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 GOLGA6DP0CG33 693 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 GOLGA6AQ9NYA3 693 aa15.77■□□□□ 0.11
CHD1-212ENST00000614616 KIAA1107Q9UPP5 1409 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 TSGA10Q9BZW7 698 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 NDUFAB1O14561 156 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 LUC7L3O95232 432 aaKnown RBP15.76■□□□□ 0.11
CHD1-212ENST00000614616 SETD1BQ9UPS6 1966 aaKnown RBP15.76■□□□□ 0.11
CHD1-212ENST00000614616 OAS2P29728 719 aaKnown RBP15.76■□□□□ 0.11
CHD1-212ENST00000614616 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
CHD1-212ENST00000614616 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 RASAL2Q9UJF2 1139 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 RPGRIP1LQ68CZ1 1315 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
CHD1-212ENST00000614616 RAD21O60216 631 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 SLC8A1P32418 973 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 ELF2Q15723 593 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
CHD1-212ENST00000614616 DESP17661 470 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
CHD1-212ENST00000614616 CCDC196A0A1B0GTZ2 297 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 STMN2Q93045 179 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHD1-212ENST00000614616 PHACTR2O75167 634 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 SYT10Q6XYQ8 523 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHD1-212ENST00000614616 VAV2P52735 878 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 EFCAB2Q5VUJ9 269 aa15.75■□□□□ 0.11
CHD1-212ENST00000614616 CYLC1P35663 651 aaPredicted RBP15.74■□□□□ 0.11
CHD1-212ENST00000614616 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
CHD1-212ENST00000614616 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
CHD1-212ENST00000614616 CPLX3Q8WVH0 158 aa15.74■□□□□ 0.11
CHD1-212ENST00000614616 SIL1Q9H173 461 aa15.74■□□□□ 0.11
CHD1-212ENST00000614616 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
CHD1-212ENST00000614616 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 PPFIBP2Q8ND30 876 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
CHD1-212ENST00000614616 GTF2E1P29083 439 aaPredicted RBP15.73■□□□□ 0.11
CHD1-212ENST00000614616 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
CHD1-212ENST00000614616 DZIP1Q86YF9 867 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms