RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 KLHL40Q2TBA0 621 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CCDC14Q49A88 953 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CTAGE15A4D2H0 777 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CTAGE8P0CG41 777 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 TDRD12Q587J7 1177 aaKnown RBP16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CTAGE6Q86UF2 777 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CTAGE4Q8IX94 777 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBE3A-207ENST00000614096 SLU7O95391 586 aaKnown RBP16.93■□□□□ 0.3
UBE3A-207ENST00000614096 STK3Q13188 491 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CNNM3Q8NE01 707 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
UBE3A-207ENST00000614096 GNG11P61952 73 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 CFAP58Q5T655 872 aa16.93■□□□□ 0.3
UBE3A-207ENST00000614096 TUBB2AQ13885 445 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 RPUSD2Q8IZ73 545 aaKnown RBP16.92■□□□□ 0.3
UBE3A-207ENST00000614096 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 TUBB2BQ9BVA1 445 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 RMND1Q9NWS8 449 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 ZSCAN16Q9H4T2 348 aaPredicted RBP16.92■□□□□ 0.3
UBE3A-207ENST00000614096 ATP2A2P16615 1042 aaKnown RBP16.92■□□□□ 0.3
UBE3A-207ENST00000614096 FAM76AQ8TAV0 307 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 CAMK4Q16566 473 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 WHAMMP3Q1A5X7 153 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 ARHGAP24Q8N264 748 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 MYH9P35579 1960 aaKnown RBP16.92■□□□□ 0.3
UBE3A-207ENST00000614096 C8orf76Q96K31 380 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 CIB2O75838 187 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 ZNF76P36508 570 aa16.92■□□□□ 0.3
UBE3A-207ENST00000614096 SSBP05455 408 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3A-207ENST00000614096 ZNF165P49910 485 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 VAV2P52735 878 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 IRX4P78413 519 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 USP37Q86T82 979 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
UBE3A-207ENST00000614096 TMC6Q7Z403 805 aa16.91■□□□□ 0.3
UBE3A-207ENST00000614096 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
UBE3A-207ENST00000614096 NOP2P46087 812 aaKnown RBP16.9■□□□□ 0.3
UBE3A-207ENST00000614096 PSME1Q06323 249 aa16.9■□□□□ 0.3
UBE3A-207ENST00000614096 MAP7Q14244 749 aa16.9■□□□□ 0.3
UBE3A-207ENST00000614096 KLHL10Q6JEL2 608 aa16.9■□□□□ 0.3
UBE3A-207ENST00000614096 CNNM1Q9NRU3 951 aa16.9■□□□□ 0.3
UBE3A-207ENST00000614096 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.3
UBE3A-207ENST00000614096 TPD52P55327 224 aaPredicted RBP16.89■□□□□ 0.3
UBE3A-207ENST00000614096 CROCCP2Q86T23 111 aa16.89■□□□□ 0.3
UBE3A-207ENST00000614096 FERMT2Q96AC1 680 aa16.89■□□□□ 0.3
UBE3A-207ENST00000614096 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
UBE3A-207ENST00000614096 SMC1BQ8NDV3 1235 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
UBE3A-207ENST00000614096 KRT86O43790 486 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.295e-8■■■■□ 26.4
UBE3A-207ENST00000614096 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 MPNDQ8N594 471 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 RASSF2P50749 326 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 GABPB1Q06547 395 aaPredicted RBP16.89■□□□□ 0.29
UBE3A-207ENST00000614096 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
UBE3A-207ENST00000614096 PCK1P35558 622 aa16.89■□□□□ 0.29
UBE3A-207ENST00000614096 PRC1O43663 620 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 ODF2LQ9ULJ1 636 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 KRT83P78385 493 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
UBE3A-207ENST00000614096 PSMC4P43686 418 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 NUF2Q9BZD4 464 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 MRVI1Q9Y6F6 885 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
UBE3A-207ENST00000614096 BMP15O95972 392 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
UBE3A-207ENST00000614096 CCDC96Q2M329 555 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 EHMT1Q9H9B1 1298 aa16.88■□□□□ 0.29
UBE3A-207ENST00000614096 SPAG1Q07617 926 aa16.87■□□□□ 0.29
UBE3A-207ENST00000614096 TWISTNBQ3B726 338 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-207ENST00000614096 LRSAM1Q6UWE0 723 aa16.87■□□□□ 0.29
UBE3A-207ENST00000614096 BUB1BO60566 1050 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-207ENST00000614096 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
UBE3A-207ENST00000614096 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
UBE3A-207ENST00000614096 NOLC1Q14978 699 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBE3A-207ENST00000614096 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
UBE3A-207ENST00000614096 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
UBE3A-207ENST00000614096 CALML4Q96GE6 196 aa16.86■□□□□ 0.29
UBE3A-207ENST00000614096 BCAP29Q9UHQ4 241 aa16.86■□□□□ 0.29
UBE3A-207ENST00000614096 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
UBE3A-207ENST00000614096 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
UBE3A-207ENST00000614096 SPATS2Q86XZ4 545 aaKnown RBP16.86■□□□□ 0.29
UBE3A-207ENST00000614096 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
UBE3A-207ENST00000614096 LUC7L3O95232 432 aaKnown RBP16.85■□□□□ 0.29
UBE3A-207ENST00000614096 RBBP5Q15291 538 aaKnown RBP16.85■□□□□ 0.29
UBE3A-207ENST00000614096 TRPC3Q13507 836 aa16.85■□□□□ 0.29
UBE3A-207ENST00000614096 CWC27Q6UX04 472 aaKnown RBP16.85■□□□□ 0.29
UBE3A-207ENST00000614096 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
UBE3A-207ENST00000614096 DZIP1Q86YF9 867 aaKnown RBP16.85■□□□□ 0.29
UBE3A-207ENST00000614096 MTMR7Q9Y216 660 aa16.85■□□□□ 0.29
UBE3A-207ENST00000614096 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms