RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PCDH11YQ9BZA8 1340 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 PHKG2P15735 406 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 TSR1Q2NL82 804 aaKnown RBP6.5□□□□□ -1.37
SYCP1-209ENST00000613524 NBPF14Q5TI25 921 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 TMEM106CQ9BVX2 250 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 PRKRIP1Q9H875 184 aaPredicted RBP6.5□□□□□ -1.37
SYCP1-209ENST00000613524 LIMD1Q9UGP4 676 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 ADAMTS8Q9UP79 889 aa6.5□□□□□ -1.37
SYCP1-209ENST00000613524 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
SYCP1-209ENST00000613524 PTGDRQ13258 359 aa6.49□□□□□ -1.37
SYCP1-209ENST00000613524 BLMP54132 1417 aaPredicted RBP6.49□□□□□ -1.37
SYCP1-209ENST00000613524 C2orf72A6NCS6 295 aa6.49□□□□□ -1.37
SYCP1-209ENST00000613524 NPHP1O15259 732 aa6.49□□□□□ -1.37
SYCP1-209ENST00000613524 EIF2S2P20042 333 aaKnown RBP6.49□□□□□ -1.37
SYCP1-209ENST00000613524 SERPINA10Q9UK55 444 aa6.49□□□□□ -1.37
SYCP1-209ENST00000613524 BRD4O60885 1362 aaPredicted RBP6.48□□□□□ -1.37
SYCP1-209ENST00000613524 APAF1O14727 1248 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 ANXA1P04083 346 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 SSTR3P32745 418 aaPredicted RBP6.48□□□□□ -1.37
SYCP1-209ENST00000613524 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 MYSM1Q5VVJ2 828 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 TTC5Q8N0Z6 440 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 CDCA7Q9BWT1 371 aaPredicted RBP6.48□□□□□ -1.37
SYCP1-209ENST00000613524 STK32BQ9NY57 414 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 NRAPQ86VF7 1730 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 RIPK4P57078 832 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 QPCTQ16769 361 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 KRT24Q2M2I5 525 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 AMIGO3Q86WK7 504 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 PLPP6Q8IY26 295 aa6.48□□□□□ -1.37
SYCP1-209ENST00000613524 CAMKK2Q96RR4 588 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 BCL11AQ9H165 835 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 IVNS1ABPQ9Y6Y0 642 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 CRYBG1Q9Y4K1 1723 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 IGSF1Q8N6C5 1336 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 PALLDQ8WX93 1383 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 LMO7Q8WWI1 1683 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 LOC102724428A0A0B4J2F2 783 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 MYL6BP14649 208 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 SIK1P57059 783 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 HIC1Q14526 733 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 DNAJC10Q8IXB1 793 aa6.47□□□□□ -1.37
SYCP1-209ENST00000613524 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.47□□□□□ -1.37
SYCP1-209ENST00000613524 NWD2Q9ULI1 1742 aa6.46□□□□□ -1.37
SYCP1-209ENST00000613524 TNS2Q63HR2 1409 aa6.46□□□□□ -1.37
SYCP1-209ENST00000613524 PRKAR2AP13861 404 aaKnown RBP6.46□□□□□ -1.38
SYCP1-209ENST00000613524 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
SYCP1-209ENST00000613524 MYBBP1AQ9BQG0 1328 aaKnown RBP6.46□□□□□ -1.38
SYCP1-209ENST00000613524 COL18A1P39060 1754 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 GNAT3A8MTJ3 354 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 AIMP1Q12904 312 aaKnown RBP6.46□□□□□ -1.38
SYCP1-209ENST00000613524 ITPK1Q13572 414 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 IL17REQ8NFR9 667 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 AKT1S1Q96B36 256 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 SRP68Q9UHB9 627 aaKnown RBP6.46□□□□□ -1.38
SYCP1-209ENST00000613524 RTL1A6NKG5 1358 aa6.46□□□□□ -1.38
SYCP1-209ENST00000613524 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.45□□□□□ -1.38
SYCP1-209ENST00000613524 E9PSI1 815 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 RFC5P40937 340 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 SH3D19Q5HYK7 790 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 NPDC1Q9NQX5 325 aaPredicted RBP6.45□□□□□ -1.38
SYCP1-209ENST00000613524 NSD2O96028 1365 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 RNMTO43148 476 aaKnown RBP6.45□□□□□ -1.38
SYCP1-209ENST00000613524 A1BGP04217 495 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 MAP3K9P80192 1104 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 GOLGA2Q08379 1002 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 RALBP1Q15311 655 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 DCAF5Q96JK2 942 aa6.45□□□□□ -1.38
SYCP1-209ENST00000613524 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 TSR2Q969E8 191 aaKnown RBP6.44□□□□□ -1.38
SYCP1-209ENST00000613524 ZNF496Q96IT1 587 aaPredicted RBP6.44□□□□□ -1.38
SYCP1-209ENST00000613524 SLC15A2Q16348 729 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 TSPYL4Q9UJ04 414 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 LRRC37A3O60309 1634 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 AKAP4Q5JQC9 854 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 CCDC125Q86Z20 511 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 GAS2L2Q8NHY3 880 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 SLC4A9Q96Q91 983 aa6.44□□□□□ -1.38
SYCP1-209ENST00000613524 DISP2A7MBM2 1401 aa6.43□□□□□ -1.38
SYCP1-209ENST00000613524 GOPCQ9HD26 462 aa6.43□□□□□ -1.38
SYCP1-209ENST00000613524 RFC4P35249 363 aa6.43□□□□□ -1.38
SYCP1-209ENST00000613524 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
SYCP1-209ENST00000613524 SLC52A2Q9HAB3 445 aa6.43□□□□□ -1.38
SYCP1-209ENST00000613524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.43□□□□□ -1.38
SYCP1-209ENST00000613524 ZBTB1Q9Y2K1 713 aa6.43□□□□□ -1.38
SYCP1-209ENST00000613524 TBC1D12O60347 775 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 ZNF526Q8TF50 670 aaPredicted RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 USP16Q9Y5T5 823 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 FCHSD2O94868 740 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 HSP90AB1P08238 724 aaKnown RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 GPTP24298 496 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 CRKLP46109 303 aaKnown RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 SKIV2LQ15477 1246 aaKnown RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 MICALL2Q8IY33 904 aa6.42□□□□□ -1.38
SYCP1-209ENST00000613524 JARID2Q92833 1246 aaPredicted RBP6.42□□□□□ -1.38
SYCP1-209ENST00000613524 BCL2L13Q9BXK5 485 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms