RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NBPF26B4DH59 902 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 NBPF14Q5TI25 921 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
SEMA6C-209ENST00000613223 NBPF15Q8N660 670 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 PLBD2Q8NHP8 589 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 KAZALD1Q96I82 304 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 LRP6O75581 1613 aa22■■□□□ 1.11
SEMA6C-209ENST00000613223 PTCD1O75127 700 aaKnown RBP21.99■■□□□ 1.11
SEMA6C-209ENST00000613223 TSHZ3Q63HK5 1081 aa21.99■■□□□ 1.11
SEMA6C-209ENST00000613223 BICC1Q9H694 974 aaKnown RBP21.99■■□□□ 1.11
SEMA6C-209ENST00000613223 AFDNP55196 1824 aaKnown RBP21.99■■□□□ 1.11
SEMA6C-209ENST00000613223 FRAT2O75474 233 aaPredicted RBP21.98■■□□□ 1.11
SEMA6C-209ENST00000613223 ERC1Q8IUD2 1116 aa21.98■■□□□ 1.11
SEMA6C-209ENST00000613223 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
SEMA6C-209ENST00000613223 OS9Q13438 667 aaPredicted RBP21.97■■□□□ 1.11
SEMA6C-209ENST00000613223 ITGB4P16144 1822 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 COL15A1P39059 1388 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 NUTM1Q86Y26 1132 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 PIGBQ92521 554 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 KIF2CQ99661 725 aa21.96■■□□□ 1.11
SEMA6C-209ENST00000613223 A1BGP04217 495 aa21.95■■□□□ 1.1
SEMA6C-209ENST00000613223 EXOC5O00471 708 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 TOM1O60784 492 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 SNX21Q969T3 373 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 REC8O95072 547 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 CDCA7Q9BWT1 371 aaPredicted RBP21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 USP26Q9BXU7 913 aa21.94■■□□□ 1.1
SEMA6C-209ENST00000613223 USP42Q9H9J4 1324 aaKnown RBP21.93■■□□□ 1.1
SEMA6C-209ENST00000613223 ERC2O15083 957 aa21.93■■□□□ 1.1
SEMA6C-209ENST00000613223 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
SEMA6C-209ENST00000613223 PA2G4Q9UQ80 394 aaKnown RBP21.93■■□□□ 1.1
SEMA6C-209ENST00000613223 BCL9O00512 1426 aa21.93■■□□□ 1.1
SEMA6C-209ENST00000613223 TTLL7Q6ZT98 887 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 CLASRPQ8N2M8 674 aaKnown RBP21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 ASAP1Q9ULH1 1129 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 TRIM6-TRIM34B2RNG4 842 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 ATP5J2-PTCD1G3V325 749 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 PI4K2BQ8TCG2 481 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 ATG3Q9NT62 314 aa21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
SEMA6C-209ENST00000613223 SPATA31A1Q5TZJ5 1347 aa21.91■■□□□ 1.1
SEMA6C-209ENST00000613223 TTC41PQ6P2S7 1318 aa21.91■■□□□ 1.1
SEMA6C-209ENST00000613223 EPHA10Q5JZY3 1008 aa21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 UBE3BQ7Z3V4 1068 aa21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 RILPL2Q969X0 211 aa21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 A0A087WZG4 1122 aa21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 G3BP1Q13283 466 aaKnown RBP eCLIP21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 NWD2Q9ULI1 1742 aa21.9■■□□□ 1.1
SEMA6C-209ENST00000613223 RABL6Q3YEC7 729 aaPredicted RBP21.89■■□□□ 1.09
SEMA6C-209ENST00000613223 ANTXR1Q9H6X2 564 aa21.89■■□□□ 1.09
SEMA6C-209ENST00000613223 CHMLP26374 656 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 CASP7P55210 303 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 PIP4K2BP78356 416 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 SLKQ9H2G2 1235 aaPredicted RBP21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 DNAJC10Q8IXB1 793 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 ESYT1Q9BSJ8 1104 aa21.88■■□□□ 1.09
SEMA6C-209ENST00000613223 TJP1Q07157 1748 aa21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 STARD3NLO95772 234 aa21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 CWC25Q9NXE8 425 aaPredicted RBP21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 AK9Q5TCS8 1911 aa21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 GLRX3O76003 335 aaKnown RBP21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
SEMA6C-209ENST00000613223 SLIT2O94813 1529 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 NUTM2BA6NNL0 878 aaPredicted RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 NUTM2EB1AL46 878 aaPredicted RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 H7C1W4 665 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 SASH1O94885 1247 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 IFIT2P09913 472 aaKnown RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 RABEP1Q15276 862 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 ZBTB3Q9H5J0 574 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 COPRSQ9NQ92 184 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
SEMA6C-209ENST00000613223 CCDC191Q8NCU4 936 aa21.85■■□□□ 1.09
SEMA6C-209ENST00000613223 ECHDC1Q9NTX5 307 aa21.85■■□□□ 1.09
SEMA6C-209ENST00000613223 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
SEMA6C-209ENST00000613223 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 RFX5P48382 616 aaPredicted RBP21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 DDB1Q16531 1140 aa21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 AACSQ86V21 672 aa21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 SIL1Q9H173 461 aa21.84■■□□□ 1.09
SEMA6C-209ENST00000613223 KLHDC4Q8TBB5 520 aa21.83■■□□□ 1.08
SEMA6C-209ENST00000613223 BRPF3Q9ULD4 1205 aa21.83■■□□□ 1.08
SEMA6C-209ENST00000613223 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
SEMA6C-209ENST00000613223 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
SEMA6C-209ENST00000613223 PTPN12Q05209 780 aaKnown RBP21.81■■□□□ 1.08
SEMA6C-209ENST00000613223 KIF6Q6ZMV9 814 aa21.81■■□□□ 1.08
SEMA6C-209ENST00000613223 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
SEMA6C-209ENST00000613223 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
SEMA6C-209ENST00000613223 MAP4K4O95819 1239 aaPredicted RBP21.81■■□□□ 1.08
SEMA6C-209ENST00000613223 PRIM1P49642 420 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms