RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 USP27XA6NNY8 438 aa19.68■□□□□ 0.74
TSKU-205ENST00000612930 ME3Q16798 604 aa19.68■□□□□ 0.74
TSKU-205ENST00000612930 VPS53Q5VIR6 699 aa19.68■□□□□ 0.74
TSKU-205ENST00000612930 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
TSKU-205ENST00000612930 RBM43Q6ZSC3 357 aaKnown RBP19.68■□□□□ 0.74
TSKU-205ENST00000612930 CLIP2Q9UDT6 1046 aa19.68■□□□□ 0.74
TSKU-205ENST00000612930 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
TSKU-205ENST00000612930 TTC21AQ8NDW8 1320 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 ZSCAN31Q96LW9 406 aaPredicted RBP19.67■□□□□ 0.74
TSKU-205ENST00000612930 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.67■□□□□ 0.74
TSKU-205ENST00000612930 V9GYY5 206 aaPredicted RBP19.67■□□□□ 0.74
TSKU-205ENST00000612930 DLC1Q96QB1 1528 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 FLIIQ13045 1269 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
TSKU-205ENST00000612930 CDC37L1Q7L3B6 337 aa19.67■□□□□ 0.74
TSKU-205ENST00000612930 SH2B1Q9NRF2 756 aaPredicted RBP19.67■□□□□ 0.74
TSKU-205ENST00000612930 CCDC66A2RUB6 948 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 RBM6P78332 1123 aaKnown RBP19.66■□□□□ 0.74
TSKU-205ENST00000612930 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
TSKU-205ENST00000612930 NCKAP5LQ9HCH0 1330 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 VGLL3A8MV65 326 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 PDE4CQ08493 712 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 FBXO38Q6PIJ6 1188 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
TSKU-205ENST00000612930 PTH1RQ03431 593 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 ARID5BQ14865 1188 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 LARP1BQ659C4 914 aaKnown RBP19.65■□□□□ 0.74
TSKU-205ENST00000612930 FOXO3O43524 673 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 ZNF165P49910 485 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 NYAP1Q6ZVC0 841 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 DNAJC25Q9H1X3 360 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 CLSTN2Q9H4D0 955 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 ZSWIM6Q9HCJ5 1215 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 ST7Q9NRC1 585 aa19.65■□□□□ 0.74
TSKU-205ENST00000612930 LRRC8AQ8IWT6 810 aa19.64■□□□□ 0.73
TSKU-205ENST00000612930 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
TSKU-205ENST00000612930 ERBB3P21860 1342 aa19.64■□□□□ 0.73
TSKU-205ENST00000612930 CCDC171Q6TFL3 1326 aa19.64■□□□□ 0.73
TSKU-205ENST00000612930 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
TSKU-205ENST00000612930 DDX54Q8TDD1 881 aaKnown RBP19.64■□□□□ 0.73
TSKU-205ENST00000612930 DDX19AQ9NUU7 478 aaKnown RBP19.64■□□□□ 0.73
TSKU-205ENST00000612930 MON2Q7Z3U7 1717 aa19.63■□□□□ 0.73
TSKU-205ENST00000612930 CDC25BP30305 580 aa19.63■□□□□ 0.73
TSKU-205ENST00000612930 SURF6O75683 361 aaKnown RBP19.63■□□□□ 0.73
TSKU-205ENST00000612930 ELF2Q15723 593 aa19.63■□□□□ 0.73
TSKU-205ENST00000612930 PRPF40BQ6NWY9 871 aaKnown RBP19.63■□□□□ 0.73
TSKU-205ENST00000612930 TIGD1Q96MW7 591 aa19.63■□□□□ 0.73
TSKU-205ENST00000612930 NAP1L2Q9ULW6 460 aaPredicted RBP19.63■□□□□ 0.73
TSKU-205ENST00000612930 WASLO00401 505 aaPredicted RBP19.62■□□□□ 0.73
TSKU-205ENST00000612930 RAB11FIP3O75154 756 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 TFIP11Q9UBB9 837 aaKnown RBP19.62■□□□□ 0.73
TSKU-205ENST00000612930 TPCN1Q9ULQ1 816 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 CYP46A1Q9Y6A2 500 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 TM6SF1Q9BZW5 370 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 C3P01024 1663 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 CRYBG1Q9Y4K1 1723 aa19.62■□□□□ 0.73
TSKU-205ENST00000612930 ERICH4A6NGS2 130 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 NR1I2O75469 434 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 PTPN14Q15678 1187 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 NECTIN2Q92692 538 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 KCNB2Q92953 911 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 ERO1AQ96HE7 468 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 ZNF446Q9NWS9 450 aa19.61■□□□□ 0.73
TSKU-205ENST00000612930 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 COL9A3Q14050 684 aaPredicted RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 SLFNL1Q499Z3 407 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 LEO1Q8WVC0 666 aaPredicted RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 SPATA32Q96LK8 384 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 FAM208AQ9UK61 1670 aaKnown RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 GOLGA6L4A6NEF3 574 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 POLA2Q14181 598 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 SCAND2PQ9GZW5 306 aaPredicted RBP19.6■□□□□ 0.73
TSKU-205ENST00000612930 RGPD1P0DJD0 1748 aa19.6■□□□□ 0.73
TSKU-205ENST00000612930 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
TSKU-205ENST00000612930 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
TSKU-205ENST00000612930 PGBD1Q96JS3 809 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 IQCB1Q15051 598 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 HSP90AB2PQ58FF8 381 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 KIF1BPQ96EK5 621 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
TSKU-205ENST00000612930 SKILP12757 684 aa19.59■□□□□ 0.73
TSKU-205ENST00000612930 CDK11BP21127 795 aaKnown RBP19.59■□□□□ 0.73
TSKU-205ENST00000612930 TTC21BQ7Z4L5 1316 aa19.58■□□□□ 0.73
TSKU-205ENST00000612930 NECTIN1Q15223 517 aa19.58■□□□□ 0.73
TSKU-205ENST00000612930 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.73
TSKU-205ENST00000612930 SARM1Q6SZW1 724 aa19.58■□□□□ 0.73
TSKU-205ENST00000612930 CCZ1BP86790 482 aa19.58■□□□□ 0.72
TSKU-205ENST00000612930 CCZ1P86791 482 aaPredicted RBP19.58■□□□□ 0.72
TSKU-205ENST00000612930 TRMT1Q9NXH9 659 aaKnown RBP19.58■□□□□ 0.72
TSKU-205ENST00000612930 RIMS1Q86UR5 1692 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms