RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 ZNF330Q9Y3S2 320 aaPredicted RBP21.03■□□□□ 0.96
LTBP4-233ENST00000612121 TMEM88BA6NKF7 163 aa21.02■□□□□ 0.96
LTBP4-233ENST00000612121 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
LTBP4-233ENST00000612121 C7orf43Q8WVR3 580 aa21.02■□□□□ 0.96
LTBP4-233ENST00000612121 WBP1LQ9NX94 342 aa21.02■□□□□ 0.96
LTBP4-233ENST00000612121 ST5P78524 1137 aa21.01■□□□□ 0.95
LTBP4-233ENST00000612121 A1BGP04217 495 aa21■□□□□ 0.95
LTBP4-233ENST00000612121 IL17REQ8NFR9 667 aa21■□□□□ 0.95
LTBP4-233ENST00000612121 NPHP1O15259 732 aa20.99■□□□□ 0.95
LTBP4-233ENST00000612121 DIAPH1O60610 1272 aaKnown RBP20.99■□□□□ 0.95
LTBP4-233ENST00000612121 LBX1P52954 281 aa20.99■□□□□ 0.95
LTBP4-233ENST00000612121 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
LTBP4-233ENST00000612121 ADAMTSL1Q8N6G6 1762 aa20.98■□□□□ 0.95
LTBP4-233ENST00000612121 TEFQ10587 303 aa20.98■□□□□ 0.95
LTBP4-233ENST00000612121 ZNF541Q9H0D2 1346 aa20.98■□□□□ 0.95
LTBP4-233ENST00000612121 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
LTBP4-233ENST00000612121 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
LTBP4-233ENST00000612121 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
LTBP4-233ENST00000612121 FMNL2Q96PY5 1086 aa20.97■□□□□ 0.95
LTBP4-233ENST00000612121 RASSF10A6NK89 507 aa20.96■□□□□ 0.95
LTBP4-233ENST00000612121 SLC34A2O95436 690 aa20.96■□□□□ 0.95
LTBP4-233ENST00000612121 NPM2Q86SE8 214 aaKnown RBP20.96■□□□□ 0.95
LTBP4-233ENST00000612121 DZIP3Q86Y13 1208 aaKnown RBP20.96■□□□□ 0.95
LTBP4-233ENST00000612121 HACL1Q9UJ83 578 aa20.96■□□□□ 0.95
LTBP4-233ENST00000612121 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
LTBP4-233ENST00000612121 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
LTBP4-233ENST00000612121 NPR1P16066 1061 aa20.95■□□□□ 0.94
LTBP4-233ENST00000612121 FKBP4Q02790 459 aaKnown RBP eCLIP20.95■□□□□ 0.94
LTBP4-233ENST00000612121 ZNF277Q9NRM2 450 aaPredicted RBP20.95■□□□□ 0.94
LTBP4-233ENST00000612121 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
LTBP4-233ENST00000612121 HSPA8P11142 646 aaKnown RBP20.94■□□□□ 0.94
LTBP4-233ENST00000612121 EPHX2P34913 555 aa20.94■□□□□ 0.94
LTBP4-233ENST00000612121 DEFB115Q30KQ5 88 aa20.94■□□□□ 0.94
LTBP4-233ENST00000612121 NBPF5PQ86XG9 351 aaPredicted RBP20.94■□□□□ 0.94
LTBP4-233ENST00000612121 KCNQ3O43525 872 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 CLEC4GQ6UXB4 293 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 CNTROBQ8N137 903 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 ABHD8Q96I13 439 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 CLSPNQ9HAW4 1339 aa20.93■□□□□ 0.94
LTBP4-233ENST00000612121 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-233ENST00000612121 MAP1SQ66K74 1059 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-233ENST00000612121 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-233ENST00000612121 USP16Q9Y5T5 823 aa20.92■□□□□ 0.94
LTBP4-233ENST00000612121 FZD9O00144 591 aa20.91■□□□□ 0.94
LTBP4-233ENST00000612121 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
LTBP4-233ENST00000612121 RTKN2Q8IZC4 609 aa20.91■□□□□ 0.94
LTBP4-233ENST00000612121 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
LTBP4-233ENST00000612121 WDR33Q9C0J8 1336 aaKnown RBP20.91■□□□□ 0.94
LTBP4-233ENST00000612121 COL3A1P02461 1466 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-233ENST00000612121 PIP4K2AP48426 406 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-233ENST00000612121 MAP2K1Q02750 393 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-233ENST00000612121 FAM161AQ3B820 660 aa20.89■□□□□ 0.93
LTBP4-233ENST00000612121 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
LTBP4-233ENST00000612121 PER1O15534 1290 aaPredicted RBP20.88■□□□□ 0.93
LTBP4-233ENST00000612121 IARSP41252 1262 aaKnown RBP20.88■□□□□ 0.93
LTBP4-233ENST00000612121 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
LTBP4-233ENST00000612121 GPC2Q8N158 579 aa20.88■□□□□ 0.93
LTBP4-233ENST00000612121 SYNE4Q8N205 404 aa20.88■□□□□ 0.93
LTBP4-233ENST00000612121 ZNF652Q9Y2D9 606 aa20.88■□□□□ 0.93
LTBP4-233ENST00000612121 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
LTBP4-233ENST00000612121 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
LTBP4-233ENST00000612121 CC2D1BQ5T0F9 858 aaKnown RBP20.87■□□□□ 0.93
LTBP4-233ENST00000612121 ABT1Q9ULW3 272 aaKnown RBP20.87■□□□□ 0.93
LTBP4-233ENST00000612121 DDX21Q9NR30 783 aaKnown RBP eCLIP20.86■□□□□ 0.93
LTBP4-233ENST00000612121 SNED1Q8TER0 1413 aa20.86■□□□□ 0.93
LTBP4-233ENST00000612121 RGL2O15211 777 aa20.85■□□□□ 0.93
LTBP4-233ENST00000612121 ALDH1B1P30837 517 aa20.85■□□□□ 0.93
LTBP4-233ENST00000612121 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
LTBP4-233ENST00000612121 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
LTBP4-233ENST00000612121 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
LTBP4-233ENST00000612121 PSMD1Q99460 953 aa20.84■□□□□ 0.93
LTBP4-233ENST00000612121 THSD7BQ9C0I4 1608 aa20.84■□□□□ 0.93
LTBP4-233ENST00000612121 NBPF26B4DH59 902 aa20.83■□□□□ 0.93
LTBP4-233ENST00000612121 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
LTBP4-233ENST00000612121 NBPF10Q6P3W6 841 aaKnown RBP20.83■□□□□ 0.93
LTBP4-233ENST00000612121 NBPF15Q8N660 670 aa20.83■□□□□ 0.93
LTBP4-233ENST00000612121 LTBP1Q14766 1721 aa20.83■□□□□ 0.92
LTBP4-233ENST00000612121 FAM177BA6PVY3 158 aa20.82■□□□□ 0.92
LTBP4-233ENST00000612121 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.929e-7■■■■□ 23.3
LTBP4-233ENST00000612121 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
LTBP4-233ENST00000612121 COL4A5P29400 1685 aa20.82■□□□□ 0.92
LTBP4-233ENST00000612121 RGS19P49795 217 aa20.81■□□□□ 0.92
LTBP4-233ENST00000612121 HLFQ16534 295 aa20.81■□□□□ 0.92
LTBP4-233ENST00000612121 CAPNS2Q96L46 248 aa20.81■□□□□ 0.92
LTBP4-233ENST00000612121 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
LTBP4-233ENST00000612121 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
LTBP4-233ENST00000612121 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
LTBP4-233ENST00000612121 EPS15P42566 896 aa20.79■□□□□ 0.92
LTBP4-233ENST00000612121 ECE1P42892 770 aa20.79■□□□□ 0.92
LTBP4-233ENST00000612121 SCNN1DP51172 638 aa20.79■□□□□ 0.92
LTBP4-233ENST00000612121 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
LTBP4-233ENST00000612121 MLLT1Q03111 559 aaPredicted RBP20.79■□□□□ 0.92
LTBP4-233ENST00000612121 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
LTBP4-233ENST00000612121 CCDC85CA6NKD9 419 aa20.78■□□□□ 0.92
LTBP4-233ENST00000612121 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
LTBP4-233ENST00000612121 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
LTBP4-233ENST00000612121 CST9Q5W186 159 aa20.78■□□□□ 0.92
LTBP4-233ENST00000612121 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms