RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SETDB2Q96T68 719 aa33.78■■■■□ 3
VEGFA-226ENST00000611736 NRXN2Q9P2S2 1712 aa33.78■■■■□ 3
VEGFA-226ENST00000611736 CARMIL3Q8ND23 1372 aa33.77■■■■□ 3
VEGFA-226ENST00000611736 KIAA1551Q9HCM1 1747 aa33.77■■■■□ 3
VEGFA-226ENST00000611736 TGFB2P61812 414 aa33.77■■■■□ 3
VEGFA-226ENST00000611736 HDGFL1Q5TGJ6 251 aa33.77■■■■□ 3
VEGFA-226ENST00000611736 TSR2Q969E8 191 aaKnown RBP33.77■■■■□ 3
VEGFA-226ENST00000611736 A0A0G2JLW4 131 aa33.76■■■□□ 2.99
VEGFA-226ENST00000611736 YBX3P16989 372 aaKnown RBP eCLIP33.76■■■□□ 2.99
VEGFA-226ENST00000611736 HLFQ16534 295 aa33.76■■■□□ 2.99
VEGFA-226ENST00000611736 DPEP1P16444 411 aa33.75■■■□□ 2.99
VEGFA-226ENST00000611736 MAP3K15Q6ZN16 1313 aa33.75■■■□□ 2.99
VEGFA-226ENST00000611736 ELL2O00472 640 aaPredicted RBP33.74■■■□□ 2.99
VEGFA-226ENST00000611736 LRP10Q7Z4F1 713 aa33.74■■■□□ 2.99
VEGFA-226ENST00000611736 C8orf58Q8NAV2 365 aa33.73■■■□□ 2.99
VEGFA-226ENST00000611736 ZBTB3Q9H5J0 574 aa33.73■■■□□ 2.99
VEGFA-226ENST00000611736 CHPF2Q9P2E5 772 aa33.73■■■□□ 2.99
VEGFA-226ENST00000611736 IL16Q14005 1332 aa33.73■■■□□ 2.99
VEGFA-226ENST00000611736 ERVV-1B6SEH8 477 aa33.72■■■□□ 2.99
VEGFA-226ENST00000611736 RGL2O15211 777 aa33.72■■■□□ 2.99
VEGFA-226ENST00000611736 DDX21Q9NR30 783 aaKnown RBP eCLIP33.72■■■□□ 2.99
VEGFA-226ENST00000611736 NIP7Q9Y221 180 aaKnown RBP eCLIP33.72■■■□□ 2.99
VEGFA-226ENST00000611736 NUP98P52948 1817 aa33.71■■■□□ 2.99
VEGFA-226ENST00000611736 WDR63Q8IWG1 891 aa33.7■■■□□ 2.99
VEGFA-226ENST00000611736 CCDC24Q8N4L8 307 aa33.7■■■□□ 2.99
VEGFA-226ENST00000611736 NPHP1O15259 732 aa33.69■■■□□ 2.98
VEGFA-226ENST00000611736 AIMP1Q12904 312 aaKnown RBP33.69■■■□□ 2.98
VEGFA-226ENST00000611736 PRR5LQ6MZQ0 368 aa33.69■■■□□ 2.98
VEGFA-226ENST00000611736 XAGE3Q8WTP9 111 aa33.69■■■□□ 2.98
VEGFA-226ENST00000611736 CHRNA5P30532 468 aa33.68■■■□□ 2.98
VEGFA-226ENST00000611736 COPS6Q7L5N1 327 aa33.68■■■□□ 2.98
VEGFA-226ENST00000611736 CNBD1Q8NA66 436 aa33.68■■■□□ 2.98
VEGFA-226ENST00000611736 NBPF5PQ86XG9 351 aaPredicted RBP33.67■■■□□ 2.98
VEGFA-226ENST00000611736 TSPYL6Q8N831 410 aa33.67■■■□□ 2.98
VEGFA-226ENST00000611736 MIER1Q8N108 512 aa33.66■■■□□ 2.98
VEGFA-226ENST00000611736 DBF4Q9UBU7 674 aaPredicted RBP33.66■■■□□ 2.98
VEGFA-226ENST00000611736 FAM177BA6PVY3 158 aa33.65■■■□□ 2.98
VEGFA-226ENST00000611736 GRIN3BO60391 1043 aa33.65■■■□□ 2.98
VEGFA-226ENST00000611736 KCNA3P22001 575 aa33.65■■■□□ 2.98
VEGFA-226ENST00000611736 FANCIQ9NVI1 1328 aa33.64■■■□□ 2.98
VEGFA-226ENST00000611736 BRCA1P38398 1863 aaKnown RBP33.64■■■□□ 2.98
VEGFA-226ENST00000611736 ANKRD31Q8N7Z5 1873 aa33.64■■■□□ 2.98
VEGFA-226ENST00000611736 ATP10DQ9P241 1426 aa33.63■■■□□ 2.97
VEGFA-226ENST00000611736 GPTP24298 496 aa33.63■■■□□ 2.97
VEGFA-226ENST00000611736 ST5P78524 1137 aa33.63■■■□□ 2.97
VEGFA-226ENST00000611736 BCS1LQ9Y276 419 aa33.63■■■□□ 2.97
VEGFA-226ENST00000611736 CHD4Q14839 1912 aa33.62■■■□□ 2.97
VEGFA-226ENST00000611736 GIGYF2Q6Y7W6 1299 aaKnown RBP33.62■■■□□ 2.97
VEGFA-226ENST00000611736 C2CD5Q86YS7 1000 aa33.61■■■□□ 2.97
VEGFA-226ENST00000611736 BRIP1Q9BX63 1249 aa33.61■■■□□ 2.97
VEGFA-226ENST00000611736 SPINK5Q9NQ38 1064 aaPredicted RBP33.61■■■□□ 2.97
VEGFA-226ENST00000611736 HYPKQ9NX55 129 aa33.61■■■□□ 2.97
VEGFA-226ENST00000611736 PIM2Q9P1W9 311 aa33.61■■■□□ 2.97
VEGFA-226ENST00000611736 TPTE2Q6XPS3 522 aa33.59■■■□□ 2.97
VEGFA-226ENST00000611736 UBN2Q6ZU65 1347 aa33.58■■■□□ 2.97
VEGFA-226ENST00000611736 TWISTNBQ3B726 338 aaPredicted RBP33.58■■■□□ 2.97
VEGFA-226ENST00000611736 CCDC30Q5VVM6 783 aa33.58■■■□□ 2.97
VEGFA-226ENST00000611736 H0YIN7 160 aa33.57■■■□□ 2.96
VEGFA-226ENST00000611736 PDE6BP35913 854 aa33.57■■■□□ 2.96
VEGFA-226ENST00000611736 DALRD3Q5D0E6 543 aaKnown RBP33.57■■■□□ 2.96
VEGFA-226ENST00000611736 ZNF34Q8IZ26 560 aa33.57■■■□□ 2.96
VEGFA-226ENST00000611736 GOLGA2Q08379 1002 aa33.56■■■□□ 2.96
VEGFA-226ENST00000611736 CHMP4AQ9BY43 222 aa33.56■■■□□ 2.96
VEGFA-226ENST00000611736 ZNF521Q96K83 1311 aa33.55■■■□□ 2.96
VEGFA-226ENST00000611736 DLEC1Q9Y238 1755 aa33.55■■■□□ 2.96
VEGFA-226ENST00000611736 GTF2E1P29083 439 aaPredicted RBP33.55■■■□□ 2.96
VEGFA-226ENST00000611736 MYH16Q9H6N6 1097 aa33.55■■■□□ 2.96
VEGFA-226ENST00000611736 COL11A2P13942 1736 aaPredicted RBP33.54■■■□□ 2.96
VEGFA-226ENST00000611736 TCERG1O14776 1098 aaKnown RBP33.54■■■□□ 2.96
VEGFA-226ENST00000611736 NYXQ9GZU5 481 aa33.54■■■□□ 2.96
VEGFA-226ENST00000611736 PHAXQ9H814 394 aaKnown RBP33.54■■■□□ 2.96
VEGFA-226ENST00000611736 EXOSC9Q06265 439 aaKnown RBP33.53■■■□□ 2.96
VEGFA-226ENST00000611736 HSP90AB3PQ58FF7 597 aa33.53■■■□□ 2.96
VEGFA-226ENST00000611736 SUSD4Q5VX71 490 aa33.53■■■□□ 2.96
VEGFA-226ENST00000611736 ANKRD13DQ6ZTN6 518 aa33.53■■■□□ 2.96
VEGFA-226ENST00000611736 NUTM1Q86Y26 1132 aa33.53■■■□□ 2.96
VEGFA-226ENST00000611736 PLBD2Q8NHP8 589 aa33.53■■■□□ 2.96
VEGFA-226ENST00000611736 ANKRD36CQ5JPF3 1778 aa33.52■■■□□ 2.96
VEGFA-226ENST00000611736 ZNF622Q969S3 477 aaKnown RBP eCLIP33.52■■■□□ 2.963e-13■□□□□ 10.7
VEGFA-226ENST00000611736 PDZRN3Q9UPQ7 1066 aa33.52■■■□□ 2.96
VEGFA-226ENST00000611736 ARFGEF1Q9Y6D6 1849 aa33.51■■■□□ 2.96
VEGFA-226ENST00000611736 PARP10Q53GL7 1025 aa33.51■■■□□ 2.95
VEGFA-226ENST00000611736 TCIRG1Q13488 830 aa33.5■■■□□ 2.95
VEGFA-226ENST00000611736 STK31Q9BXU1 1019 aa33.5■■■□□ 2.95
VEGFA-226ENST00000611736 ABCC12Q96J65 1359 aa33.49■■■□□ 2.95
VEGFA-226ENST00000611736 IBTKQ9P2D0 1353 aaPredicted RBP33.49■■■□□ 2.95
VEGFA-226ENST00000611736 ERFEQ4G0M1 354 aa33.49■■■□□ 2.95
VEGFA-226ENST00000611736 NTSR2O95665 410 aa33.48■■■□□ 2.95
VEGFA-226ENST00000611736 PPP1R42Q7Z4L9 355 aa33.48■■■□□ 2.95
VEGFA-226ENST00000611736 TTLL6Q8N841 843 aa33.48■■■□□ 2.95
VEGFA-226ENST00000611736 ZNF784Q8NCA9 323 aaPredicted RBP33.48■■■□□ 2.95
VEGFA-226ENST00000611736 ARHGAP27Q6ZUM4 889 aa33.47■■■□□ 2.95
VEGFA-226ENST00000611736 RIC3Q7Z5B4 369 aa33.47■■■□□ 2.95
VEGFA-226ENST00000611736 ARFGEF2Q9Y6D5 1785 aa33.47■■■□□ 2.95
VEGFA-226ENST00000611736 VAMP4O75379 141 aa33.46■■■□□ 2.95
VEGFA-226ENST00000611736 NLRP10Q86W26 655 aa33.46■■■□□ 2.95
VEGFA-226ENST00000611736 UTP14AQ9BVJ6 771 aaKnown RBP33.46■■■□□ 2.95
VEGFA-226ENST00000611736 SRGNP10124 158 aa33.45■■■□□ 2.95
VEGFA-226ENST00000611736 ZNF428Q96B54 188 aa33.45■■■□□ 2.95
VEGFA-226ENST00000611736 TNRC6CQ9HCJ0 1690 aaKnown RBP33.45■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms