RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 ZNF853P0CG23 659 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 PYCARDQ9ULZ3 195 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 MORC2Q9Y6X9 1032 aaPredicted RBP14.3□□□□□ -0.12
TP53-220ENST00000610623 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
TP53-220ENST00000610623 FLT4P35916 1363 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 SLFN14P0C7P3 912 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 UBE2HP62256 183 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
TP53-220ENST00000610623 FAM193AP78312 1265 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 IL17RAQ96F46 866 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 OSBPL3Q9H4L5 887 aa14.29□□□□□ -0.12
TP53-220ENST00000610623 SLC20A2Q08357 652 aa14.28□□□□□ -0.12
TP53-220ENST00000610623 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
TP53-220ENST00000610623 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
TP53-220ENST00000610623 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
TP53-220ENST00000610623 TSPYL6Q8N831 410 aa14.27□□□□□ -0.12
TP53-220ENST00000610623 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.12
TP53-220ENST00000610623 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
TP53-220ENST00000610623 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.13
TP53-220ENST00000610623 RPAP1Q9BWH6 1393 aaPredicted RBP14.27□□□□□ -0.13
TP53-220ENST00000610623 RGS12O14924 1447 aa14.27□□□□□ -0.13
TP53-220ENST00000610623 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
TP53-220ENST00000610623 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 ADGRL3Q9HAR2 1447 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 NPHP4O75161 1426 aaPredicted RBP14.26□□□□□ -0.13
TP53-220ENST00000610623 ZMYND10O75800 440 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 TERF2Q15554 542 aa14.26□□□□□ -0.13
TP53-220ENST00000610623 TWISTNBQ3B726 338 aaPredicted RBP14.26□□□□□ -0.13
TP53-220ENST00000610623 GPBP1L1Q9HC44 474 aaPredicted RBP14.26□□□□□ -0.13
TP53-220ENST00000610623 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 CEP85Q6P2H3 762 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 CREBRFQ8IUR6 639 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
TP53-220ENST00000610623 TCHHQ07283 1943 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 KIF18AQ8NI77 898 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 TIGD1Q96MW7 591 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 MFRPQ9BY79 579 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 ATP6V1DQ9Y5K8 247 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 KDRP35968 1356 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 AP5Z1O43299 807 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 EPB41L2O43491 1005 aaKnown RBP14.24□□□□□ -0.13
TP53-220ENST00000610623 IRX5P78411 483 aaPredicted RBP14.24□□□□□ -0.13
TP53-220ENST00000610623 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
TP53-220ENST00000610623 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 THUMPD2Q9BTF0 503 aaKnown RBP14.24□□□□□ -0.13
TP53-220ENST00000610623 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
TP53-220ENST00000610623 KCNJ4P48050 445 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 FOXD4L6Q3SYB3 417 aaPredicted RBP14.23□□□□□ -0.13
TP53-220ENST00000610623 FOXD4L3Q6VB84 417 aaPredicted RBP14.23□□□□□ -0.13
TP53-220ENST00000610623 AMPHP49418 695 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 NLRP6P59044 892 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 PHF8Q9UPP1 1060 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
TP53-220ENST00000610623 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
TP53-220ENST00000610623 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
TP53-220ENST00000610623 PDE1AP54750 535 aa14.22□□□□□ -0.13
TP53-220ENST00000610623 SPC24Q8NBT2 197 aa14.22□□□□□ -0.13
TP53-220ENST00000610623 CCDC112Q8NEF3 446 aa14.22□□□□□ -0.13
TP53-220ENST00000610623 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
TP53-220ENST00000610623 ELL2O00472 640 aaPredicted RBP14.21□□□□□ -0.13
TP53-220ENST00000610623 E2F4Q16254 413 aa14.21□□□□□ -0.13
TP53-220ENST00000610623 IGSF1Q8N6C5 1336 aa14.21□□□□□ -0.13
TP53-220ENST00000610623 HMMRO75330 724 aa14.21□□□□□ -0.13
TP53-220ENST00000610623 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
TP53-220ENST00000610623 PALD1Q9ULE6 856 aa14.21□□□□□ -0.13
TP53-220ENST00000610623 LTN1O94822 1766 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 PPP1R37O75864 691 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
TP53-220ENST00000610623 TNNT1P13805 278 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 FAM53CQ9NYF3 392 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 SOX12O15370 315 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 PTGS1P23219 599 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 ZNF397Q8NF99 534 aaPredicted RBP14.2□□□□□ -0.14
TP53-220ENST00000610623 FAM200AQ8TCP9 573 aa14.2□□□□□ -0.14
TP53-220ENST00000610623 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
TP53-220ENST00000610623 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
TP53-220ENST00000610623 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 TSPYL1Q9H0U9 437 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.19□□□□□ -0.14
TP53-220ENST00000610623 ABTB2Q8N961 1025 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 C16orf45Q96MC5 204 aaPredicted RBP14.19□□□□□ -0.14
TP53-220ENST00000610623 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
TP53-220ENST00000610623 LRRC37A3O60309 1634 aa14.19□□□□□ -0.14
TP53-220ENST00000610623 VGLL3A8MV65 326 aa14.18□□□□□ -0.14
TP53-220ENST00000610623 TULP2O00295 520 aa14.18□□□□□ -0.14
TP53-220ENST00000610623 CHL1O00533 1208 aa14.18□□□□□ -0.14
TP53-220ENST00000610623 STX6O43752 255 aa14.18□□□□□ -0.14
TP53-220ENST00000610623 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
TP53-220ENST00000610623 ANO2Q9NQ90 1003 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms