RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SPHKAPQ2M3C7 1700 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 KIF1BO60333 1816 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 BRD1O95696 1058 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 TATP17735 454 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 C16orf45Q96MC5 204 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 SNX14Q9Y5W7 946 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 PRR36Q9H6K5 1346 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 KCNQ3O43525 872 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 LAMC1P11047 1609 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 NOLC1Q14978 699 aaKnown RBP eCLIP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 STK38Q15208 465 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 FAM135BQ49AJ0 1406 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 NFXL1Q6ZNB6 911 aa8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 SYTL4Q96C24 671 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 RNF17Q9BXT8 1623 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-206ENST00000610556 TTC21AQ8NDW8 1320 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 TPM3P06753 285 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 MCM5P33992 734 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 NMIQ13287 307 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 TSC1Q92574 1164 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 PPP1R9BQ96SB3 815 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 DACT1Q9NYF0 836 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 SGSM2O43147 1006 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 CABP4P57796 275 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 CPLX2Q6PUV4 134 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 RAB11FIP4Q86YS3 637 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 A0A087WZG4 1122 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 KCNA6P17658 529 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 LTKP29376 864 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 FAM227BQ96M60 508 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 CFAP74Q9C0B2 1584 aa8.11□□□□□ -1.11
SYNPO2-206ENST00000610556 EVA1CP58658 441 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 KCNH5Q8NCM2 988 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 GRM8O00222 908 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 ZNF165P49910 485 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 CCDC112Q8NEF3 446 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 BRF1Q92994 677 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 MAP3K5Q99683 1374 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 TRIM29Q14134 588 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 KRT32Q14532 448 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 CREB3L3Q68CJ9 461 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 COPS6Q7L5N1 327 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 HYPKQ9NX55 129 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 TRMT1Q9NXH9 659 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 GOLIM4O00461 696 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 ATF3P18847 181 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 HSPA4P34932 840 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 LRRFIP1Q32MZ4 808 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 AMOTQ4VCS5 1084 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 KSR2Q6VAB6 950 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 CCDC186Q7Z3E2 898 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 ANKLE2Q86XL3 938 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 PDCL2Q8N4E4 241 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
SYNPO2-206ENST00000610556 TULP4Q9NRJ4 1543 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 CDK11BP21127 795 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 ANO6Q4KMQ2 910 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 LUZP1Q86V48 1076 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 EDC3Q96F86 508 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 ZNF396Q96N95 335 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 NAT10Q9H0A0 1025 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 PTCH1Q13635 1447 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 RAD50Q92878 1312 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 HAND2P61296 217 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 UVSSAQ2YD98 709 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 NEK1Q96PY6 1258 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 ABCC3O15438 1527 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 IQSEC2Q5JU85 1478 aa8.09□□□□□ -1.11
SYNPO2-206ENST00000610556 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 PTH1RQ03431 593 aa8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 PDILTQ8N807 584 aa8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.12
SYNPO2-206ENST00000610556 PNPLA6Q8IY17 1366 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 BIN1O00499 593 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 TTC39AQ5SRH9 613 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 NBPF6Q5VWK0 638 aa8.08□□□□□ -1.12
SYNPO2-206ENST00000610556 CHST3Q7LGC8 479 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms