RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LARP1BQ659C4 914 aaKnown RBP24.43■■□□□ 1.5
SSBP3-216ENST00000610401 CLASRPQ8N2M8 674 aaKnown RBP24.43■■□□□ 1.5
SSBP3-216ENST00000610401 NAP1L2Q9ULW6 460 aaPredicted RBP24.43■■□□□ 1.5
SSBP3-216ENST00000610401 A0A087WWV3 80 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 UBE2HP62256 183 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 DNAAF4Q8WXU2 420 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
SSBP3-216ENST00000610401 USP6P35125 1406 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 FLT4P35916 1363 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 TEFQ10587 303 aa24.42■■□□□ 1.5
SSBP3-216ENST00000610401 GOLGA6L4A6NEF3 574 aa24.41■■□□□ 1.5
SSBP3-216ENST00000610401 RAB11FIP3O75154 756 aa24.41■■□□□ 1.5
SSBP3-216ENST00000610401 CDC37L1Q7L3B6 337 aa24.41■■□□□ 1.5
SSBP3-216ENST00000610401 LRRC2Q9BYS8 371 aa24.41■■□□□ 1.5
SSBP3-216ENST00000610401 HYPKQ9NX55 129 aa24.41■■□□□ 1.5
SSBP3-216ENST00000610401 TLR7Q9NYK1 1049 aaKnown RBP24.41■■□□□ 1.5
SSBP3-216ENST00000610401 LIG1P18858 919 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 CYP46A1Q9Y6A2 500 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 DYNC1I1O14576 645 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 KDM4AO75164 1064 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 TTC14Q96N46 770 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 MAP3K2Q9Y2U5 619 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 PLEKHG3A1L390 1219 aa24.4■■□□□ 1.5
SSBP3-216ENST00000610401 MTMR6Q9Y217 621 aa24.39■■□□□ 1.5
SSBP3-216ENST00000610401 TPCN1Q9ULQ1 816 aa24.39■■□□□ 1.49
SSBP3-216ENST00000610401 LRMPQ12912 555 aa24.38■■□□□ 1.49
SSBP3-216ENST00000610401 BTBD11A6QL63 1104 aa24.38■■□□□ 1.49
SSBP3-216ENST00000610401 PTGS1P23219 599 aa24.38■■□□□ 1.49
SSBP3-216ENST00000610401 IGSF1Q8N6C5 1336 aa24.38■■□□□ 1.49
SSBP3-216ENST00000610401 RBM8AQ9Y5S9 174 aaKnown RBP24.38■■□□□ 1.49
SSBP3-216ENST00000610401 MCM5P33992 734 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 NRBP1Q9UHY1 535 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 MYL6BP14649 208 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 NBPF6Q5VWK0 638 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 PIBF1Q8WXW3 757 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 NBPF4Q96M43 638 aa24.37■■□□□ 1.49
SSBP3-216ENST00000610401 OVOS2A0A0J9YW53 1432 aa24.36■■□□□ 1.49
SSBP3-216ENST00000610401 OVOS2Q6IE36 1432 aa24.36■■□□□ 1.49
SSBP3-216ENST00000610401 TTC6Q86TZ1 520 aa24.36■■□□□ 1.49
SSBP3-216ENST00000610401 FSD1Q9BTV5 496 aa24.36■■□□□ 1.49
SSBP3-216ENST00000610401 ZKSCAN1P17029 563 aaPredicted RBP24.36■■□□□ 1.49
SSBP3-216ENST00000610401 NMIQ13287 307 aaPredicted RBP24.36■■□□□ 1.49
SSBP3-216ENST00000610401 ZNF592Q92610 1267 aa24.36■■□□□ 1.49
SSBP3-216ENST00000610401 ST3GAL1Q11201 340 aa24.35■■□□□ 1.49
SSBP3-216ENST00000610401 BEND3Q5T5X7 828 aa24.35■■□□□ 1.49
SSBP3-216ENST00000610401 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
SSBP3-216ENST00000610401 DACT1Q9NYF0 836 aa24.35■■□□□ 1.49
SSBP3-216ENST00000610401 PPP4R3BQ5MIZ7 849 aa24.35■■□□□ 1.49
SSBP3-216ENST00000610401 ERCC4Q92889 916 aaPredicted RBP24.35■■□□□ 1.49
SSBP3-216ENST00000610401 C16orf45Q96MC5 204 aaPredicted RBP24.35■■□□□ 1.49
SSBP3-216ENST00000610401 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
SSBP3-216ENST00000610401 GLRX3O76003 335 aaKnown RBP24.34■■□□□ 1.49
SSBP3-216ENST00000610401 KCNF1Q9H3M0 494 aa24.34■■□□□ 1.49
SSBP3-216ENST00000610401 ZNF710Q8N1W2 664 aa24.34■■□□□ 1.49
SSBP3-216ENST00000610401 MAP3K5Q99683 1374 aa24.34■■□□□ 1.49
SSBP3-216ENST00000610401 RICTORQ6R327 1708 aa24.34■■□□□ 1.49
SSBP3-216ENST00000610401 ARHGEF10O15013 1369 aa24.33■■□□□ 1.49
SSBP3-216ENST00000610401 BICD2Q8TD16 824 aa24.33■■□□□ 1.49
SSBP3-216ENST00000610401 ECHDC1Q9NTX5 307 aa24.33■■□□□ 1.49
SSBP3-216ENST00000610401 ATP6V1DQ9Y5K8 247 aa24.33■■□□□ 1.49
SSBP3-216ENST00000610401 FAM184AQ8NB25 1140 aa24.33■■□□□ 1.48
SSBP3-216ENST00000610401 MYRIPQ8NFW9 859 aa24.33■■□□□ 1.48
SSBP3-216ENST00000610401 EID1Q9Y6B2 187 aa24.33■■□□□ 1.48
SSBP3-216ENST00000610401 PEAK1Q9H792 1746 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 HSP90B1P14625 803 aaKnown RBP24.32■■□□□ 1.48
SSBP3-216ENST00000610401 EIF4A1P60842 406 aaKnown RBP24.32■■□□□ 1.48
SSBP3-216ENST00000610401 SLFNL1Q499Z3 407 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 REREQ9P2R6 1566 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 A0A0D9SFI3 127 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 JAK2O60674 1132 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 FGD1P98174 961 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 CREB3L3Q68CJ9 461 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 LARP1Q6PKG0 1096 aaKnown RBP24.32■■□□□ 1.48
SSBP3-216ENST00000610401 SLC39A6Q13433 755 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 CCDC129Q6ZRS4 1044 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 TRIM5Q9C035 493 aa24.32■■□□□ 1.48
SSBP3-216ENST00000610401 NAA30Q147X3 362 aaPredicted RBP24.31■■□□□ 1.48
SSBP3-216ENST00000610401 CCDC186Q7Z3E2 898 aa24.31■■□□□ 1.48
SSBP3-216ENST00000610401 KIF3AQ9Y496 699 aa24.31■■□□□ 1.48
SSBP3-216ENST00000610401 POLA2Q14181 598 aa24.31■■□□□ 1.48
SSBP3-216ENST00000610401 ANO6Q4KMQ2 910 aa24.31■■□□□ 1.48
SSBP3-216ENST00000610401 RUFY2Q8WXA3 655 aa24.31■■□□□ 1.48
SSBP3-216ENST00000610401 EAF2Q96CJ1 260 aaPredicted RBP24.31■■□□□ 1.48
SSBP3-216ENST00000610401 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 TNRQ92752 1358 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 RIOK3O14730 519 aaKnown RBP24.3■■□□□ 1.48
SSBP3-216ENST00000610401 CCDC192P0DO97 292 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 DNAJC2Q99543 621 aaKnown RBP24.3■■□□□ 1.48
SSBP3-216ENST00000610401 NUP62CLQ9H1M0 184 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 TNMDQ9H2S6 317 aa24.3■■□□□ 1.48
SSBP3-216ENST00000610401 TMEM2Q9UHN6 1383 aa24.29■■□□□ 1.48
SSBP3-216ENST00000610401 TERF1P54274 439 aa24.29■■□□□ 1.48
SSBP3-216ENST00000610401 ZNF589Q86UQ0 364 aaPredicted RBP24.29■■□□□ 1.48
SSBP3-216ENST00000610401 BCL2L12Q9HB09 334 aa24.29■■□□□ 1.48
SSBP3-216ENST00000610401 G3BP1Q13283 466 aaKnown RBP eCLIP24.29■■□□□ 1.48
SSBP3-216ENST00000610401 FTOQ9C0B1 505 aaKnown RBP eCLIP24.29■■□□□ 1.481e-6■■□□□ 11.8
SSBP3-216ENST00000610401 BICC1Q9H694 974 aaKnown RBP24.29■■□□□ 1.48
SSBP3-216ENST00000610401 KCNA6P17658 529 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms