RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
HDDC2-209ENST00000609477 GPR162Q16538 588 aa18.46■□□□□ 0.55
HDDC2-209ENST00000609477 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
HDDC2-209ENST00000609477 NUP98P52948 1817 aa18.45■□□□□ 0.54
HDDC2-209ENST00000609477 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
HDDC2-209ENST00000609477 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
HDDC2-209ENST00000609477 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
HDDC2-209ENST00000609477 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
HDDC2-209ENST00000609477 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 HLFQ16534 295 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 TTLL7Q6ZT98 887 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 C8orf58Q8NAV2 365 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
HDDC2-209ENST00000609477 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
HDDC2-209ENST00000609477 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
HDDC2-209ENST00000609477 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 HSP90AB3PQ58FF7 597 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 TSR2Q969E8 191 aaKnown RBP18.43■□□□□ 0.54
HDDC2-209ENST00000609477 BRIP1Q9BX63 1249 aa18.43■□□□□ 0.54
HDDC2-209ENST00000609477 PDE6BP35913 854 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 ST5P78524 1137 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 NBPF5PQ86XG9 351 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-209ENST00000609477 MIER1Q8N108 512 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 FANCIQ9NVI1 1328 aa18.42■□□□□ 0.54
HDDC2-209ENST00000609477 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-209ENST00000609477 N4BP2Q86UW6 1770 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-209ENST00000609477 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 A0A0G2JLW4 131 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-209ENST00000609477 NPHP1O15259 732 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 DPEP1P16444 411 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-209ENST00000609477 ZNF34Q8IZ26 560 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
HDDC2-209ENST00000609477 ANXA1P04083 346 aa18.4■□□□□ 0.54
HDDC2-209ENST00000609477 KCNA3P22001 575 aa18.4■□□□□ 0.54
HDDC2-209ENST00000609477 PARP10Q53GL7 1025 aa18.4■□□□□ 0.54
HDDC2-209ENST00000609477 ANKRD13DQ6ZTN6 518 aa18.4■□□□□ 0.54
HDDC2-209ENST00000609477 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
HDDC2-209ENST00000609477 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.54
HDDC2-209ENST00000609477 H0YIN7 160 aa18.39■□□□□ 0.53
HDDC2-209ENST00000609477 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
HDDC2-209ENST00000609477 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
HDDC2-209ENST00000609477 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
HDDC2-209ENST00000609477 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
HDDC2-209ENST00000609477 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.532e-9■□□□□ 10.6
HDDC2-209ENST00000609477 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
HDDC2-209ENST00000609477 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
HDDC2-209ENST00000609477 CHD4Q14839 1912 aa18.37■□□□□ 0.53
HDDC2-209ENST00000609477 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
HDDC2-209ENST00000609477 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
HDDC2-209ENST00000609477 E9PSI1 815 aa18.37■□□□□ 0.53
HDDC2-209ENST00000609477 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
HDDC2-209ENST00000609477 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
HDDC2-209ENST00000609477 KLRG2A4D1S0 409 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-209ENST00000609477 DDX58O95786 925 aaKnown RBP18.36■□□□□ 0.53
HDDC2-209ENST00000609477 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-209ENST00000609477 DALRD3Q5D0E6 543 aaKnown RBP18.36■□□□□ 0.53
HDDC2-209ENST00000609477 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
HDDC2-209ENST00000609477 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
HDDC2-209ENST00000609477 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
HDDC2-209ENST00000609477 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-209ENST00000609477 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 UBN2Q6ZU65 1347 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 VAMP4O75379 141 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 CHRNA5P30532 468 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
HDDC2-209ENST00000609477 BCS1LQ9Y276 419 aa18.35■□□□□ 0.53
HDDC2-209ENST00000609477 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
HDDC2-209ENST00000609477 TTLL6Q8N841 843 aa18.34■□□□□ 0.53
HDDC2-209ENST00000609477 UTRNP46939 3433 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 SRGNP10124 158 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 GPTP24298 496 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 SUSD4Q5VX71 490 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 STYK1Q6J9G0 422 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.52
HDDC2-209ENST00000609477 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
HDDC2-209ENST00000609477 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
HDDC2-209ENST00000609477 NTSR2O95665 410 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 SLC4A2P04920 1241 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 MASTLQ96GX5 879 aa18.32■□□□□ 0.52
HDDC2-209ENST00000609477 NPR1P16066 1061 aa18.31■□□□□ 0.52
HDDC2-209ENST00000609477 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
HDDC2-209ENST00000609477 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms