RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TPCN1Q9ULQ1 816 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 FANCAO15360 1455 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
RER1-209ENST00000605895 GOLGA6L19H0YKK7 550 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 PTPRCP08575 1304 aa18.28■□□□□ 0.52
RER1-209ENST00000605895 CHD1O14646 1710 aa18.27■□□□□ 0.52
RER1-209ENST00000605895 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
RER1-209ENST00000605895 HNRNPH2P55795 449 aaKnown RBP18.27■□□□□ 0.52
RER1-209ENST00000605895 LARP1Q6PKG0 1096 aaKnown RBP18.27■□□□□ 0.52
RER1-209ENST00000605895 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
RER1-209ENST00000605895 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.524e-16■■□□□ 13.3
RER1-209ENST00000605895 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.51
RER1-209ENST00000605895 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.51
RER1-209ENST00000605895 LRRC8AQ8IWT6 810 aa18.27■□□□□ 0.51
RER1-209ENST00000605895 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.51
RER1-209ENST00000605895 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.51
RER1-209ENST00000605895 EPC1Q9H2F5 836 aa18.27■□□□□ 0.51
RER1-209ENST00000605895 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.51
RER1-209ENST00000605895 FLIIQ13045 1269 aa18.26■□□□□ 0.51
RER1-209ENST00000605895 ZCCHC17Q9NP64 241 aaKnown RBP18.26■□□□□ 0.51
RER1-209ENST00000605895 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
RER1-209ENST00000605895 CCDC69A6NI79 296 aa18.26■□□□□ 0.51
RER1-209ENST00000605895 PTPN21Q16825 1174 aa18.26■□□□□ 0.51
RER1-209ENST00000605895 PUS7Q96PZ0 661 aaKnown RBP18.26■□□□□ 0.51
RER1-209ENST00000605895 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
RER1-209ENST00000605895 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
RER1-209ENST00000605895 PLA2G4DQ86XP0 818 aa18.25■□□□□ 0.51
RER1-209ENST00000605895 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
RER1-209ENST00000605895 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
RER1-209ENST00000605895 ABCC3O15438 1527 aa18.25■□□□□ 0.51
RER1-209ENST00000605895 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
RER1-209ENST00000605895 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
RER1-209ENST00000605895 BECN2A8MW95 431 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 RAB11FIP3O75154 756 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
RER1-209ENST00000605895 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
RER1-209ENST00000605895 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
RER1-209ENST00000605895 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
RER1-209ENST00000605895 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
RER1-209ENST00000605895 REREQ9P2R6 1566 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 JAK2O60674 1132 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 ANXA1P04083 346 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 GYS2P54840 703 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 RHPN1Q8TCX5 695 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
RER1-209ENST00000605895 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
RER1-209ENST00000605895 PI4K2BQ8TCG2 481 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
RER1-209ENST00000605895 SEC31AO94979 1220 aaKnown RBP18.23■□□□□ 0.51
RER1-209ENST00000605895 CNTROBQ8N137 903 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
RER1-209ENST00000605895 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
RER1-209ENST00000605895 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
RER1-209ENST00000605895 GNAI3P08754 354 aa18.22■□□□□ 0.51
RER1-209ENST00000605895 RAPGEF3O95398 923 aa18.22■□□□□ 0.51
RER1-209ENST00000605895 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
RER1-209ENST00000605895 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
RER1-209ENST00000605895 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
RER1-209ENST00000605895 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
RER1-209ENST00000605895 SLU7O95391 586 aaKnown RBP18.2■□□□□ 0.5
RER1-209ENST00000605895 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
RER1-209ENST00000605895 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
RER1-209ENST00000605895 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
RER1-209ENST00000605895 IFT172Q9UG01 1749 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 ZFYVE9O95405 1425 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 CLSTN2Q9H4D0 955 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
RER1-209ENST00000605895 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
RER1-209ENST00000605895 CLCN6P51797 869 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
RER1-209ENST00000605895 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 CCDC34Q96HJ3 373 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 ERBB3P21860 1342 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 TNNT3P45378 269 aaPredicted RBP18.19■□□□□ 0.5
RER1-209ENST00000605895 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 TDRD7Q8NHU6 1098 aaKnown RBP18.19■□□□□ 0.5
RER1-209ENST00000605895 DEPDC5O75140 1603 aa18.19■□□□□ 0.5
RER1-209ENST00000605895 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
RER1-209ENST00000605895 ST5P78524 1137 aa18.18■□□□□ 0.5
RER1-209ENST00000605895 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
RER1-209ENST00000605895 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
RER1-209ENST00000605895 CCAR2Q8N163 923 aaKnown RBP18.18■□□□□ 0.5
RER1-209ENST00000605895 AOPEPQ8N6M6 819 aa18.18■□□□□ 0.5
RER1-209ENST00000605895 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
RER1-209ENST00000605895 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
RER1-209ENST00000605895 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 BIN1O00499 593 aa18.17■□□□□ 0.5
RER1-209ENST00000605895 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms