RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 SCN7AQ01118 1682 aa19.22■□□□□ 0.67
HCG18-245ENST00000602550 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
HCG18-245ENST00000602550 VEGFBP49765 207 aa19.22■□□□□ 0.67
HCG18-245ENST00000602550 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
HCG18-245ENST00000602550 ITGBL1O95965 494 aaPredicted RBP19.21■□□□□ 0.67
HCG18-245ENST00000602550 CCDC93Q567U6 631 aa19.21■□□□□ 0.67
HCG18-245ENST00000602550 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
HCG18-245ENST00000602550 ARFGEF2Q9Y6D5 1785 aa19.21■□□□□ 0.67
HCG18-245ENST00000602550 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
HCG18-245ENST00000602550 CAMTA2O94983 1202 aa19.2■□□□□ 0.66
HCG18-245ENST00000602550 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
HCG18-245ENST00000602550 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
HCG18-245ENST00000602550 CLEC11AQ9Y240 323 aa19.2■□□□□ 0.66
HCG18-245ENST00000602550 GNAT3A8MTJ3 354 aa19.19■□□□□ 0.66
HCG18-245ENST00000602550 EAPPQ56P03 285 aaPredicted RBP19.19■□□□□ 0.66
HCG18-245ENST00000602550 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
HCG18-245ENST00000602550 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
HCG18-245ENST00000602550 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
HCG18-245ENST00000602550 HACL1Q9UJ83 578 aa19.19■□□□□ 0.66
HCG18-245ENST00000602550 A1BGP04217 495 aa19.18■□□□□ 0.66
HCG18-245ENST00000602550 LBX1P52954 281 aa19.18■□□□□ 0.66
HCG18-245ENST00000602550 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
HCG18-245ENST00000602550 DEFB115Q30KQ5 88 aa19.18■□□□□ 0.66
HCG18-245ENST00000602550 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
HCG18-245ENST00000602550 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
HCG18-245ENST00000602550 IL17REQ8NFR9 667 aa19.18■□□□□ 0.66
HCG18-245ENST00000602550 NPR1P16066 1061 aa19.17■□□□□ 0.66
HCG18-245ENST00000602550 FKBP4Q02790 459 aaKnown RBP eCLIP19.17■□□□□ 0.66
HCG18-245ENST00000602550 NBPF5PQ86XG9 351 aaPredicted RBP19.17■□□□□ 0.66
HCG18-245ENST00000602550 EPHX2P34913 555 aa19.16■□□□□ 0.66
HCG18-245ENST00000602550 MAP2K1Q02750 393 aaPredicted RBP19.16■□□□□ 0.66
HCG18-245ENST00000602550 RTKN2Q8IZC4 609 aa19.16■□□□□ 0.66
HCG18-245ENST00000602550 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
HCG18-245ENST00000602550 RASSF10A6NK89 507 aa19.15■□□□□ 0.66
HCG18-245ENST00000602550 TPTE2Q6XPS3 522 aa19.15■□□□□ 0.66
HCG18-245ENST00000602550 KLRG2A4D1S0 409 aaPredicted RBP19.14■□□□□ 0.65
HCG18-245ENST00000602550 CNTROBQ8N137 903 aa19.14■□□□□ 0.65
HCG18-245ENST00000602550 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
HCG18-245ENST00000602550 SLC34A2O95436 690 aa19.13■□□□□ 0.65
HCG18-245ENST00000602550 ABHD8Q96I13 439 aa19.13■□□□□ 0.65
HCG18-245ENST00000602550 ZNF541Q9H0D2 1346 aa19.13■□□□□ 0.65
HCG18-245ENST00000602550 SIPA1L3O60292 1781 aaPredicted RBP19.13■□□□□ 0.65
HCG18-245ENST00000602550 BCORQ6W2J9 1755 aa19.13■□□□□ 0.65
HCG18-245ENST00000602550 WDR33Q9C0J8 1336 aaKnown RBP19.12■□□□□ 0.65
HCG18-245ENST00000602550 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
HCG18-245ENST00000602550 FZD9O00144 591 aa19.12■□□□□ 0.65
HCG18-245ENST00000602550 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
HCG18-245ENST00000602550 ALDH1B1P30837 517 aa19.12■□□□□ 0.65
HCG18-245ENST00000602550 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
HCG18-245ENST00000602550 RGL2O15211 777 aa19.11■□□□□ 0.65
HCG18-245ENST00000602550 IARSP41252 1262 aaKnown RBP19.11■□□□□ 0.65
HCG18-245ENST00000602550 MAP1SQ66K74 1059 aaPredicted RBP19.11■□□□□ 0.65
HCG18-245ENST00000602550 GPC2Q8N158 579 aa19.11■□□□□ 0.65
HCG18-245ENST00000602550 ABT1Q9ULW3 272 aaKnown RBP19.11■□□□□ 0.65
HCG18-245ENST00000602550 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
HCG18-245ENST00000602550 ADAMTSL1Q8N6G6 1762 aa19.11■□□□□ 0.65
HCG18-245ENST00000602550 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
HCG18-245ENST00000602550 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
HCG18-245ENST00000602550 JDP2Q8WYK2 163 aa19.1■□□□□ 0.65
HCG18-245ENST00000602550 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
HCG18-245ENST00000602550 BEGAINQ9BUH8 593 aa19.09■□□□□ 0.65
HCG18-245ENST00000602550 NIP7Q9Y221 180 aaKnown RBP eCLIP19.09■□□□□ 0.65
HCG18-245ENST00000602550 KCNQ3O43525 872 aa19.08■□□□□ 0.64
HCG18-245ENST00000602550 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
HCG18-245ENST00000602550 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
HCG18-245ENST00000602550 PER1O15534 1290 aaPredicted RBP19.07■□□□□ 0.64
HCG18-245ENST00000602550 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
HCG18-245ENST00000602550 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
HCG18-245ENST00000602550 ECE1P42892 770 aa19.07■□□□□ 0.64
HCG18-245ENST00000602550 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
HCG18-245ENST00000602550 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
HCG18-245ENST00000602550 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
HCG18-245ENST00000602550 OLFM4Q6UX06 510 aa19.07■□□□□ 0.64
HCG18-245ENST00000602550 PSMD1Q99460 953 aa19.07■□□□□ 0.64
HCG18-245ENST00000602550 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
HCG18-245ENST00000602550 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
HCG18-245ENST00000602550 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
HCG18-245ENST00000602550 FAM177BA6PVY3 158 aa19.04■□□□□ 0.64
HCG18-245ENST00000602550 MLLT1Q03111 559 aaPredicted RBP19.04■□□□□ 0.64
HCG18-245ENST00000602550 GRIPAP1Q4V328 841 aa19.04■□□□□ 0.64
HCG18-245ENST00000602550 CAPNS2Q96L46 248 aa19.04■□□□□ 0.64
HCG18-245ENST00000602550 GJA3Q9Y6H8 435 aa19.04■□□□□ 0.64
HCG18-245ENST00000602550 PAXIP1Q6ZW49 1069 aaPredicted RBP19.03■□□□□ 0.64
HCG18-245ENST00000602550 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
HCG18-245ENST00000602550 KIF7Q2M1P5 1343 aa19.02■□□□□ 0.64
HCG18-245ENST00000602550 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
HCG18-245ENST00000602550 CCDC85CA6NKD9 419 aa19.02■□□□□ 0.64
HCG18-245ENST00000602550 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
HCG18-245ENST00000602550 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
HCG18-245ENST00000602550 GPR101Q96P66 508 aaPredicted RBP19.02■□□□□ 0.64
HCG18-245ENST00000602550 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
HCG18-245ENST00000602550 RGS19P49795 217 aa19.01■□□□□ 0.63
HCG18-245ENST00000602550 USP50Q70EL3 339 aaPredicted RBP19.01■□□□□ 0.63
HCG18-245ENST00000602550 TRPM7Q96QT4 1865 aa19.01■□□□□ 0.63
HCG18-245ENST00000602550 NBPF26B4DH59 902 aa19■□□□□ 0.63
HCG18-245ENST00000602550 PRKAR2BP31323 418 aa19■□□□□ 0.63
HCG18-245ENST00000602550 MAP2K2P36507 400 aa19■□□□□ 0.63
HCG18-245ENST00000602550 CRY2Q49AN0 593 aa19■□□□□ 0.63
HCG18-245ENST00000602550 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
HCG18-245ENST00000602550 NBPF15Q8N660 670 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms