RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 IPO9Q96P70 1041 aaKnown RBP24.89■■□□□ 1.57
PNKP-214ENST00000600573 MYD88Q99836 296 aa24.89■■□□□ 1.57
PNKP-214ENST00000600573 LNPKQ9C0E8 428 aa24.89■■□□□ 1.57
PNKP-214ENST00000600573 GCKRQ14397 625 aa24.88■■□□□ 1.57
PNKP-214ENST00000600573 ATRNO75882 1429 aa24.88■■□□□ 1.57
PNKP-214ENST00000600573 DOT1LQ8TEK3 1739 aa24.88■■□□□ 1.57
PNKP-214ENST00000600573 CYP19A1P11511 503 aaPredicted RBP24.87■■□□□ 1.57
PNKP-214ENST00000600573 CWF19L2Q2TBE0 894 aaKnown RBP24.87■■□□□ 1.57
PNKP-214ENST00000600573 MSH5O43196 834 aa24.86■■□□□ 1.57
PNKP-214ENST00000600573 POLA2Q14181 598 aa24.86■■□□□ 1.57
PNKP-214ENST00000600573 HSP90AB4PQ58FF6 505 aa24.86■■□□□ 1.57
PNKP-214ENST00000600573 RAB11FIP3O75154 756 aa24.86■■□□□ 1.57
PNKP-214ENST00000600573 ACSBG1Q96GR2 724 aa24.86■■□□□ 1.57
PNKP-214ENST00000600573 COL15A1P39059 1388 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 A0A0G2JS52 829 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 PIP4K2AP48426 406 aaPredicted RBP24.85■■□□□ 1.57
PNKP-214ENST00000600573 MYT1Q01538 1121 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 KIF6Q6ZMV9 814 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 PPP1R42Q7Z4L9 355 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
PNKP-214ENST00000600573 PNMA6EA0A0J9YXQ4 647 aa24.84■■□□□ 1.57
PNKP-214ENST00000600573 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
PNKP-214ENST00000600573 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
PNKP-214ENST00000600573 SRGAP3O43295 1099 aa24.83■■□□□ 1.56
PNKP-214ENST00000600573 TTLL7Q6ZT98 887 aa24.83■■□□□ 1.56
PNKP-214ENST00000600573 CCDC191Q8NCU4 936 aa24.83■■□□□ 1.56
PNKP-214ENST00000600573 DDRGK1Q96HY6 314 aa24.83■■□□□ 1.56
PNKP-214ENST00000600573 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
PNKP-214ENST00000600573 SIK1P57059 783 aa24.82■■□□□ 1.56
PNKP-214ENST00000600573 TRIM28Q13263 835 aaKnown RBP24.82■■□□□ 1.56
PNKP-214ENST00000600573 HSP90AB3PQ58FF7 597 aa24.81■■□□□ 1.56
PNKP-214ENST00000600573 LRRCC1Q9C099 1032 aa24.81■■□□□ 1.56
PNKP-214ENST00000600573 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
PNKP-214ENST00000600573 ATP6V1AP38606 617 aa24.8■■□□□ 1.56
PNKP-214ENST00000600573 QTRT2Q9H974 415 aaKnown RBP24.8■■□□□ 1.56
PNKP-214ENST00000600573 CWC25Q9NXE8 425 aaPredicted RBP24.8■■□□□ 1.56
PNKP-214ENST00000600573 TCIRG1Q13488 830 aa24.79■■□□□ 1.56
PNKP-214ENST00000600573 BMP2KLQ5H9B9 411 aa24.79■■□□□ 1.56
PNKP-214ENST00000600573 NOP58Q9Y2X3 529 aaKnown RBP24.79■■□□□ 1.56
PNKP-214ENST00000600573 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
PNKP-214ENST00000600573 MAP3K15Q6ZN16 1313 aa24.78■■□□□ 1.56
PNKP-214ENST00000600573 CICQ96RK0 1608 aaPredicted RBP24.78■■□□□ 1.56
PNKP-214ENST00000600573 ERVV-1B6SEH8 477 aa24.78■■□□□ 1.56
PNKP-214ENST00000600573 SUCLG2Q96I99 432 aa24.78■■□□□ 1.56
PNKP-214ENST00000600573 A0A087WZG4 1122 aa24.77■■□□□ 1.56
PNKP-214ENST00000600573 H7C1W4 665 aa24.77■■□□□ 1.56
PNKP-214ENST00000600573 EIF5BO60841 1220 aaKnown RBP24.77■■□□□ 1.56
PNKP-214ENST00000600573 ISCA1Q9BUE6 129 aa24.77■■□□□ 1.56
PNKP-214ENST00000600573 UPF2Q9HAU5 1272 aaKnown RBP24.77■■□□□ 1.56
PNKP-214ENST00000600573 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
PNKP-214ENST00000600573 SURF6O75683 361 aaKnown RBP24.76■■□□□ 1.55
PNKP-214ENST00000600573 ERC1Q8IUD2 1116 aa24.76■■□□□ 1.55
PNKP-214ENST00000600573 ZBTB3Q9H5J0 574 aa24.76■■□□□ 1.55
PNKP-214ENST00000600573 CCDC87Q9NVE4 849 aa24.76■■□□□ 1.55
PNKP-214ENST00000600573 EXOC6BQ9Y2D4 811 aa24.76■■□□□ 1.55
PNKP-214ENST00000600573 ZNF831Q5JPB2 1677 aa24.76■■□□□ 1.55
PNKP-214ENST00000600573 KCNQ2O43526 872 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 GIGYF2Q6Y7W6 1299 aaKnown RBP24.75■■□□□ 1.55
PNKP-214ENST00000600573 PLEKHM2Q8IWE5 1019 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 KIF1BPQ96EK5 621 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 KAT6BQ8WYB5 2073 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 ATP5J2-PTCD1G3V325 749 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 KAZALD1Q96I82 304 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 OSBPL3Q9H4L5 887 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 ZBTB1Q9Y2K1 713 aa24.75■■□□□ 1.55
PNKP-214ENST00000600573 BICC1Q9H694 974 aaKnown RBP24.74■■□□□ 1.55
PNKP-214ENST00000600573 TJP1Q07157 1748 aa24.73■■□□□ 1.55
PNKP-214ENST00000600573 EIF5P55010 431 aaKnown RBP24.73■■□□□ 1.55
PNKP-214ENST00000600573 CASP7P55210 303 aa24.73■■□□□ 1.55
PNKP-214ENST00000600573 RABL6Q3YEC7 729 aaPredicted RBP24.73■■□□□ 1.55
PNKP-214ENST00000600573 ZNF772Q68DY9 489 aaPredicted RBP24.73■■□□□ 1.55
PNKP-214ENST00000600573 NUP188Q5SRE5 1749 aa24.73■■□□□ 1.55
PNKP-214ENST00000600573 AFDNP55196 1824 aaKnown RBP24.73■■□□□ 1.55
PNKP-214ENST00000600573 INTS5Q6P9B9 1019 aaKnown RBP24.72■■□□□ 1.55
PNKP-214ENST00000600573 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
PNKP-214ENST00000600573 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
PNKP-214ENST00000600573 UBE3BQ7Z3V4 1068 aa24.72■■□□□ 1.55
PNKP-214ENST00000600573 SEC24BO95487 1268 aa24.71■■□□□ 1.55
PNKP-214ENST00000600573 APBB1O00213 710 aa24.7■■□□□ 1.54
PNKP-214ENST00000600573 DZIP3Q86Y13 1208 aaKnown RBP24.7■■□□□ 1.54
PNKP-214ENST00000600573 RHPN1Q8TCX5 695 aa24.7■■□□□ 1.54
PNKP-214ENST00000600573 RGL2O15211 777 aa24.69■■□□□ 1.54
PNKP-214ENST00000600573 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
PNKP-214ENST00000600573 HMGB2P26583 209 aaKnown RBP24.69■■□□□ 1.54
PNKP-214ENST00000600573 ITPK1Q13572 414 aa24.69■■□□□ 1.54
PNKP-214ENST00000600573 G3BP1Q13283 466 aaKnown RBP eCLIP24.68■■□□□ 1.54
PNKP-214ENST00000600573 TTC22Q5TAA0 569 aa24.68■■□□□ 1.54
PNKP-214ENST00000600573 C16orf71Q8IYS4 520 aaPredicted RBP24.68■■□□□ 1.54
PNKP-214ENST00000600573 AOX1Q06278 1338 aa24.68■■□□□ 1.54
PNKP-214ENST00000600573 PCCAP05165 728 aaPredicted RBP24.68■■□□□ 1.54
PNKP-214ENST00000600573 OS9Q13438 667 aaPredicted RBP24.68■■□□□ 1.54
PNKP-214ENST00000600573 RC3H1Q5TC82 1133 aaKnown RBP24.68■■□□□ 1.54
PNKP-214ENST00000600573 ARXQ96QS3 562 aa24.68■■□□□ 1.54
PNKP-214ENST00000600573 STAP2Q9UGK3 403 aa24.68■■□□□ 1.54
PNKP-214ENST00000600573 NHSQ6T4R5 1651 aa24.67■■□□□ 1.54
PNKP-214ENST00000600573 COPRSQ9NQ92 184 aa24.67■■□□□ 1.54
PNKP-214ENST00000600573 CNTNAP4Q9C0A0 1308 aa24.67■■□□□ 1.54
PNKP-214ENST00000600573 FAM196AQ6ZSG2 479 aa24.66■■□□□ 1.54
PNKP-214ENST00000600573 ZBTB38Q8NAP3 1195 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms