RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ERVV-1B6SEH8 477 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 RGL2O15211 777 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 HOXB7P09629 217 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 CHRNA5P30532 468 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 CCDC24Q8N4L8 307 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 C8orf58Q8NAV2 365 aa29.63■■■□□ 2.33
IRF3-220ENST00000598108 ELL2O00472 640 aaPredicted RBP29.62■■■□□ 2.33
IRF3-220ENST00000598108 HDGFL1Q5TGJ6 251 aa29.62■■■□□ 2.33
IRF3-220ENST00000598108 TSR2Q969E8 191 aaKnown RBP29.62■■■□□ 2.33
IRF3-220ENST00000598108 ZBTB3Q9H5J0 574 aa29.62■■■□□ 2.33
IRF3-220ENST00000598108 CARMIL3Q8ND23 1372 aa29.62■■■□□ 2.33
IRF3-220ENST00000598108 PRR5LQ6MZQ0 368 aa29.61■■■□□ 2.33
IRF3-220ENST00000598108 KIF6Q6ZMV9 814 aa29.61■■■□□ 2.33
IRF3-220ENST00000598108 DDX21Q9NR30 783 aaKnown RBP eCLIP29.61■■■□□ 2.33
IRF3-220ENST00000598108 CHPF2Q9P2E5 772 aa29.61■■■□□ 2.33
IRF3-220ENST00000598108 NIP7Q9Y221 180 aaKnown RBP eCLIP29.61■■■□□ 2.33
IRF3-220ENST00000598108 KIF13BQ9NQT8 1826 aa29.61■■■□□ 2.33
IRF3-220ENST00000598108 GRIN3BO60391 1043 aa29.6■■■□□ 2.33
IRF3-220ENST00000598108 COPS6Q7L5N1 327 aa29.59■■■□□ 2.33
IRF3-220ENST00000598108 YY1P25490 414 aa29.58■■■□□ 2.33
IRF3-220ENST00000598108 IL16Q14005 1332 aa29.58■■■□□ 2.33
IRF3-220ENST00000598108 TSPYL6Q8N831 410 aa29.58■■■□□ 2.33
IRF3-220ENST00000598108 XAGE3Q8WTP9 111 aa29.58■■■□□ 2.33
IRF3-220ENST00000598108 KIAA1551Q9HCM1 1747 aa29.57■■■□□ 2.32
IRF3-220ENST00000598108 CCER2I3L3R5 266 aa29.57■■■□□ 2.32
IRF3-220ENST00000598108 WDR63Q8IWG1 891 aa29.57■■■□□ 2.32
IRF3-220ENST00000598108 BCORQ6W2J9 1755 aa29.57■■■□□ 2.32
IRF3-220ENST00000598108 NRXN2Q9P2S2 1712 aa29.57■■■□□ 2.32
IRF3-220ENST00000598108 AIMP1Q12904 312 aaKnown RBP29.56■■■□□ 2.32
IRF3-220ENST00000598108 NBPF5PQ86XG9 351 aaPredicted RBP29.56■■■□□ 2.32
IRF3-220ENST00000598108 CNBD1Q8NA66 436 aa29.56■■■□□ 2.32
IRF3-220ENST00000598108 BCS1LQ9Y276 419 aa29.56■■■□□ 2.32
IRF3-220ENST00000598108 FAM177BA6PVY3 158 aa29.55■■■□□ 2.32
IRF3-220ENST00000598108 DIEXFQ68CQ4 756 aaKnown RBP29.55■■■□□ 2.32
IRF3-220ENST00000598108 BRIP1Q9BX63 1249 aa29.55■■■□□ 2.32
IRF3-220ENST00000598108 PIM2Q9P1W9 311 aa29.55■■■□□ 2.32
IRF3-220ENST00000598108 AFDNP55196 1824 aaKnown RBP29.55■■■□□ 2.32
IRF3-220ENST00000598108 GIGYF2Q6Y7W6 1299 aaKnown RBP29.54■■■□□ 2.32
IRF3-220ENST00000598108 C2CD5Q86YS7 1000 aa29.54■■■□□ 2.32
IRF3-220ENST00000598108 DBF4Q9UBU7 674 aaPredicted RBP29.54■■■□□ 2.32
IRF3-220ENST00000598108 N4BP2Q86UW6 1770 aaPredicted RBP29.54■■■□□ 2.32
IRF3-220ENST00000598108 GPTP24298 496 aa29.53■■■□□ 2.32
IRF3-220ENST00000598108 SPINK5Q9NQ38 1064 aaPredicted RBP29.53■■■□□ 2.32
IRF3-220ENST00000598108 NPHP1O15259 732 aa29.52■■■□□ 2.32
IRF3-220ENST00000598108 ZNF34Q8IZ26 560 aa29.52■■■□□ 2.32
IRF3-220ENST00000598108 TPTE2Q6XPS3 522 aa29.51■■■□□ 2.31
IRF3-220ENST00000598108 UBN2Q6ZU65 1347 aa29.5■■■□□ 2.31
IRF3-220ENST00000598108 H0YIN7 160 aa29.5■■■□□ 2.31
IRF3-220ENST00000598108 ST5P78524 1137 aa29.5■■■□□ 2.31
IRF3-220ENST00000598108 DALRD3Q5D0E6 543 aaKnown RBP29.5■■■□□ 2.31
IRF3-220ENST00000598108 MIER1Q8N108 512 aa29.5■■■□□ 2.31
IRF3-220ENST00000598108 ATP10DQ9P241 1426 aa29.5■■■□□ 2.31
IRF3-220ENST00000598108 FANCIQ9NVI1 1328 aa29.49■■■□□ 2.31
IRF3-220ENST00000598108 PDE6BP35913 854 aa29.49■■■□□ 2.31
IRF3-220ENST00000598108 HYPKQ9NX55 129 aa29.49■■■□□ 2.31
IRF3-220ENST00000598108 SUSD4Q5VX71 490 aa29.48■■■□□ 2.31
IRF3-220ENST00000598108 NUTM1Q86Y26 1132 aa29.46■■■□□ 2.31
IRF3-220ENST00000598108 PHAXQ9H814 394 aaKnown RBP29.46■■■□□ 2.31
IRF3-220ENST00000598108 ZNF521Q96K83 1311 aa29.45■■■□□ 2.31
IRF3-220ENST00000598108 TWISTNBQ3B726 338 aaPredicted RBP29.45■■■□□ 2.31
IRF3-220ENST00000598108 CCDC30Q5VVM6 783 aa29.45■■■□□ 2.31
IRF3-220ENST00000598108 ANKRD13DQ6ZTN6 518 aa29.45■■■□□ 2.31
IRF3-220ENST00000598108 TCERG1O14776 1098 aaKnown RBP29.44■■■□□ 2.3
IRF3-220ENST00000598108 TCIRG1Q13488 830 aa29.44■■■□□ 2.3
IRF3-220ENST00000598108 ARHGAP27Q6ZUM4 889 aa29.44■■■□□ 2.3
IRF3-220ENST00000598108 PLBD2Q8NHP8 589 aa29.44■■■□□ 2.3
IRF3-220ENST00000598108 ZNF622Q969S3 477 aaKnown RBP eCLIP29.44■■■□□ 2.3
IRF3-220ENST00000598108 PDZRN3Q9UPQ7 1066 aa29.44■■■□□ 2.3
IRF3-220ENST00000598108 SRGNP10124 158 aa29.43■■■□□ 2.3
IRF3-220ENST00000598108 GTF2E1P29083 439 aaPredicted RBP29.43■■■□□ 2.3
IRF3-220ENST00000598108 ERFEQ4G0M1 354 aa29.43■■■□□ 2.3
IRF3-220ENST00000598108 TTLL6Q8N841 843 aa29.43■■■□□ 2.3
IRF3-220ENST00000598108 NYXQ9GZU5 481 aa29.43■■■□□ 2.3
IRF3-220ENST00000598108 KLRG2A4D1S0 409 aaPredicted RBP29.42■■■□□ 2.3
IRF3-220ENST00000598108 EXOSC9Q06265 439 aaKnown RBP29.42■■■□□ 2.3
IRF3-220ENST00000598108 GOLGA2Q08379 1002 aa29.42■■■□□ 2.3
IRF3-220ENST00000598108 NTSR2O95665 410 aa29.41■■■□□ 2.3
IRF3-220ENST00000598108 PARP10Q53GL7 1025 aa29.41■■■□□ 2.3
IRF3-220ENST00000598108 ABCC12Q96J65 1359 aa29.4■■■□□ 2.3
IRF3-220ENST00000598108 ANKRD31Q8N7Z5 1873 aa29.4■■■□□ 2.3
IRF3-220ENST00000598108 HSP90AB3PQ58FF7 597 aa29.4■■■□□ 2.3
IRF3-220ENST00000598108 NLRP10Q86W26 655 aa29.4■■■□□ 2.3
IRF3-220ENST00000598108 NUP98P52948 1817 aa29.4■■■□□ 2.3
IRF3-220ENST00000598108 VAMP4O75379 141 aa29.39■■■□□ 2.3
IRF3-220ENST00000598108 PPP1R42Q7Z4L9 355 aa29.39■■■□□ 2.3
IRF3-220ENST00000598108 CHMP4AQ9BY43 222 aa29.39■■■□□ 2.3
IRF3-220ENST00000598108 BRCA1P38398 1863 aaKnown RBP29.38■■■□□ 2.29
IRF3-220ENST00000598108 STYK1Q6J9G0 422 aa29.38■■■□□ 2.29
IRF3-220ENST00000598108 ZNF428Q96B54 188 aa29.38■■■□□ 2.29
IRF3-220ENST00000598108 MASTLQ96GX5 879 aa29.38■■■□□ 2.29
IRF3-220ENST00000598108 UTP14AQ9BVJ6 771 aaKnown RBP29.38■■■□□ 2.29
IRF3-220ENST00000598108 MYH16Q9H6N6 1097 aa29.38■■■□□ 2.29
IRF3-220ENST00000598108 IBTKQ9P2D0 1353 aaPredicted RBP29.38■■■□□ 2.29
IRF3-220ENST00000598108 ATP5J2-PTCD1G3V325 749 aa29.36■■■□□ 2.29
IRF3-220ENST00000598108 ISCA1Q9BUE6 129 aa29.36■■■□□ 2.29
IRF3-220ENST00000598108 RIC3Q7Z5B4 369 aa29.35■■■□□ 2.29
IRF3-220ENST00000598108 SYNE4Q8N205 404 aa29.35■■■□□ 2.29
IRF3-220ENST00000598108 ZNF784Q8NCA9 323 aaPredicted RBP29.35■■■□□ 2.29
IRF3-220ENST00000598108 SLC4A2P04920 1241 aa29.34■■■□□ 2.29
IRF3-220ENST00000598108 NPR1P16066 1061 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms