RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MYH16Q9H6N6 1097 aa22.33■■□□□ 1.17
SHKBP1-212ENST00000596163 CARMIL3Q8ND23 1372 aa22.33■■□□□ 1.17
SHKBP1-212ENST00000596163 C10orf71Q711Q0 1435 aa22.32■■□□□ 1.16
SHKBP1-212ENST00000596163 NPHP1O15259 732 aa22.32■■□□□ 1.16
SHKBP1-212ENST00000596163 TTLL7Q6ZT98 887 aa22.32■■□□□ 1.16
SHKBP1-212ENST00000596163 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
SHKBP1-212ENST00000596163 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
SHKBP1-212ENST00000596163 GOLGA2Q08379 1002 aa22.31■■□□□ 1.16
SHKBP1-212ENST00000596163 CCDC30Q5VVM6 783 aa22.31■■□□□ 1.16
SHKBP1-212ENST00000596163 CHPF2Q9P2E5 772 aa22.31■■□□□ 1.16
SHKBP1-212ENST00000596163 NIP7Q9Y221 180 aaKnown RBP eCLIP22.31■■□□□ 1.16
SHKBP1-212ENST00000596163 ANXA1P04083 346 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 HLFQ16534 295 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 PROSER3Q2NL68 480 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 COPS6Q7L5N1 327 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 LRP10Q7Z4F1 713 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 ZBTB3Q9H5J0 574 aa22.3■■□□□ 1.16
SHKBP1-212ENST00000596163 GRIN3BO60391 1043 aa22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 TPTE2Q6XPS3 522 aa22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 GIGYF2Q6Y7W6 1299 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 NBPF5PQ86XG9 351 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 XAGE3Q8WTP9 111 aa22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
SHKBP1-212ENST00000596163 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 A0A0G2JLW4 131 aa22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 ST5P78524 1137 aa22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 FANCIQ9NVI1 1328 aa22.28■■□□□ 1.16
SHKBP1-212ENST00000596163 DPEP1P16444 411 aa22.27■■□□□ 1.16
SHKBP1-212ENST00000596163 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
SHKBP1-212ENST00000596163 PDE6BP35913 854 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 PRR5LQ6MZQ0 368 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 BRIP1Q9BX63 1249 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 STK31Q9BXU1 1019 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 NYXQ9GZU5 481 aa22.26■■□□□ 1.15
SHKBP1-212ENST00000596163 GTF2E1P29083 439 aaPredicted RBP22.25■■□□□ 1.15
SHKBP1-212ENST00000596163 PIM2Q9P1W9 311 aa22.25■■□□□ 1.15
SHKBP1-212ENST00000596163 ZNF521Q96K83 1311 aa22.25■■□□□ 1.15
SHKBP1-212ENST00000596163 PXDNLA1KZ92 1463 aa22.24■■□□□ 1.15
SHKBP1-212ENST00000596163 H0YIN7 160 aa22.24■■□□□ 1.15
SHKBP1-212ENST00000596163 PARP10Q53GL7 1025 aa22.24■■□□□ 1.15
SHKBP1-212ENST00000596163 ANKRD13DQ6ZTN6 518 aa22.24■■□□□ 1.15
SHKBP1-212ENST00000596163 PLBD2Q8NHP8 589 aa22.24■■□□□ 1.15
SHKBP1-212ENST00000596163 ATP10DQ9P241 1426 aa22.23■■□□□ 1.15
SHKBP1-212ENST00000596163 BCORQ6W2J9 1755 aa22.23■■□□□ 1.15
SHKBP1-212ENST00000596163 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
SHKBP1-212ENST00000596163 ZNF34Q8IZ26 560 aa22.23■■□□□ 1.15
SHKBP1-212ENST00000596163 E9PSI1 815 aa22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 YBX3P16989 372 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 GPTP24298 496 aa22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 C2CD5Q86YS7 1000 aa22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
SHKBP1-212ENST00000596163 FAM177BA6PVY3 158 aa22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 CHRNA5P30532 468 aa22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 DALRD3Q5D0E6 543 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 BCS1LQ9Y276 419 aa22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
SHKBP1-212ENST00000596163 KCNA3P22001 575 aa22.2■■□□□ 1.14
SHKBP1-212ENST00000596163 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
SHKBP1-212ENST00000596163 NRXN2Q9P2S2 1712 aa22.2■■□□□ 1.14
SHKBP1-212ENST00000596163 VAMP4O75379 141 aa22.19■■□□□ 1.14
SHKBP1-212ENST00000596163 CCDC24Q8N4L8 307 aa22.19■■□□□ 1.14
SHKBP1-212ENST00000596163 WWC3Q9ULE0 1092 aa22.19■■□□□ 1.14
SHKBP1-212ENST00000596163 IBTKQ9P2D0 1353 aaPredicted RBP22.18■■□□□ 1.14
SHKBP1-212ENST00000596163 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
SHKBP1-212ENST00000596163 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
SHKBP1-212ENST00000596163 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
SHKBP1-212ENST00000596163 UTP14AQ9BVJ6 771 aaKnown RBP22.17■■□□□ 1.14
SHKBP1-212ENST00000596163 RNF123Q5XPI4 1314 aa22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 UBN2Q6ZU65 1347 aa22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 SLFN5Q08AF3 891 aa22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 TTLL6Q8N841 843 aa22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 ZNF622Q969S3 477 aaKnown RBP eCLIP22.16■■□□□ 1.14
SHKBP1-212ENST00000596163 NLRP10Q86W26 655 aa22.15■■□□□ 1.14
SHKBP1-212ENST00000596163 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
SHKBP1-212ENST00000596163 ERFEQ4G0M1 354 aa22.14■■□□□ 1.13
SHKBP1-212ENST00000596163 STYK1Q6J9G0 422 aa22.14■■□□□ 1.13
SHKBP1-212ENST00000596163 CNKSR1Q969H4 720 aa22.14■■□□□ 1.13
SHKBP1-212ENST00000596163 MASTLQ96GX5 879 aa22.14■■□□□ 1.13
SHKBP1-212ENST00000596163 KLRG2A4D1S0 409 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 NTSR2O95665 410 aa22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 SRGNP10124 158 aa22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 YY1P25490 414 aa22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 TRIM28Q13263 835 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 KSR2Q6VAB6 950 aa22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 NUTM1Q86Y26 1132 aa22.13■■□□□ 1.13
SHKBP1-212ENST00000596163 NPR1P16066 1061 aa22.12■■□□□ 1.13
SHKBP1-212ENST00000596163 ISCA1Q9BUE6 129 aa22.12■■□□□ 1.13
SHKBP1-212ENST00000596163 TRMT112Q9UI30 125 aaKnown RBP22.12■■□□□ 1.13
SHKBP1-212ENST00000596163 NUP98P52948 1817 aa22.12■■□□□ 1.13
SHKBP1-212ENST00000596163 SLC10A5Q5PT55 438 aa22.11■■□□□ 1.13
SHKBP1-212ENST00000596163 ARHGAP27Q6ZUM4 889 aa22.11■■□□□ 1.13
SHKBP1-212ENST00000596163 N4BP2Q86UW6 1770 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms