RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 VAMP4O75379 141 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 NFIXQ14938 502 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
LIG1-208ENST00000595758 RGL2O15211 777 aa18.48■□□□□ 0.55
LIG1-208ENST00000595758 DDR1Q08345 913 aa18.48■□□□□ 0.55
LIG1-208ENST00000595758 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
LIG1-208ENST00000595758 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
LIG1-208ENST00000595758 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
LIG1-208ENST00000595758 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
LIG1-208ENST00000595758 HLFQ16534 295 aa18.47■□□□□ 0.55
LIG1-208ENST00000595758 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
LIG1-208ENST00000595758 KLHL34Q8N239 644 aa18.47■□□□□ 0.55
LIG1-208ENST00000595758 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
LIG1-208ENST00000595758 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
LIG1-208ENST00000595758 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
LIG1-208ENST00000595758 FHDC1Q9C0D6 1143 aaPredicted RBP18.46■□□□□ 0.55
LIG1-208ENST00000595758 SCN7AQ01118 1682 aa18.45■□□□□ 0.54
LIG1-208ENST00000595758 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
LIG1-208ENST00000595758 SERPINB2P05120 415 aa18.44■□□□□ 0.54
LIG1-208ENST00000595758 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
LIG1-208ENST00000595758 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
LIG1-208ENST00000595758 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
LIG1-208ENST00000595758 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
LIG1-208ENST00000595758 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
LIG1-208ENST00000595758 NIP7Q9Y221 180 aaKnown RBP eCLIP18.43■□□□□ 0.54
LIG1-208ENST00000595758 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
LIG1-208ENST00000595758 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
LIG1-208ENST00000595758 PLBD2Q8NHP8 589 aa18.42■□□□□ 0.54
LIG1-208ENST00000595758 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
LIG1-208ENST00000595758 DDX58O95786 925 aaKnown RBP18.4■□□□□ 0.54
LIG1-208ENST00000595758 HSP90AB3PQ58FF7 597 aa18.4■□□□□ 0.54
LIG1-208ENST00000595758 G2E3Q7L622 706 aa18.4■□□□□ 0.54
LIG1-208ENST00000595758 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
LIG1-208ENST00000595758 ATP10DQ9P241 1426 aa18.4■□□□□ 0.54
LIG1-208ENST00000595758 GPTP24298 496 aa18.39■□□□□ 0.53
LIG1-208ENST00000595758 TCIRG1Q13488 830 aa18.39■□□□□ 0.53
LIG1-208ENST00000595758 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.53
LIG1-208ENST00000595758 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
LIG1-208ENST00000595758 NPHP1O15259 732 aa18.38■□□□□ 0.53
LIG1-208ENST00000595758 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
LIG1-208ENST00000595758 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
LIG1-208ENST00000595758 NLGN2Q8NFZ4 835 aa18.38■□□□□ 0.53
LIG1-208ENST00000595758 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
LIG1-208ENST00000595758 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
LIG1-208ENST00000595758 NUP98P52948 1817 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 FLIIQ13045 1269 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 PRR5LQ6MZQ0 368 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 KSR2Q6VAB6 950 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 TPTE2Q6XPS3 522 aa18.37■□□□□ 0.53
LIG1-208ENST00000595758 TGFB2P61812 414 aa18.36■□□□□ 0.53
LIG1-208ENST00000595758 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
LIG1-208ENST00000595758 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
LIG1-208ENST00000595758 ST5P78524 1137 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
LIG1-208ENST00000595758 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 CCDC24Q8N4L8 307 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 SSH1Q8WYL5 1049 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 MAP3K2Q9Y2U5 619 aa18.35■□□□□ 0.53
LIG1-208ENST00000595758 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
LIG1-208ENST00000595758 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
LIG1-208ENST00000595758 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
LIG1-208ENST00000595758 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
LIG1-208ENST00000595758 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
LIG1-208ENST00000595758 METTL22Q9BUU2 404 aaPredicted RBP18.34■□□□□ 0.53
LIG1-208ENST00000595758 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
LIG1-208ENST00000595758 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
LIG1-208ENST00000595758 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
LIG1-208ENST00000595758 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
LIG1-208ENST00000595758 A0A0G2JLW4 131 aa18.33■□□□□ 0.52
LIG1-208ENST00000595758 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
LIG1-208ENST00000595758 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
LIG1-208ENST00000595758 MYD88Q99836 296 aa18.33■□□□□ 0.52
LIG1-208ENST00000595758 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
LIG1-208ENST00000595758 ADCY9O60503 1353 aa18.32■□□□□ 0.52
LIG1-208ENST00000595758 DPEP1P16444 411 aa18.32■□□□□ 0.52
LIG1-208ENST00000595758 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
LIG1-208ENST00000595758 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
LIG1-208ENST00000595758 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
LIG1-208ENST00000595758 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
LIG1-208ENST00000595758 NTSR2O95665 410 aa18.31■□□□□ 0.52
LIG1-208ENST00000595758 PDE6BP35913 854 aa18.31■□□□□ 0.52
LIG1-208ENST00000595758 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
LIG1-208ENST00000595758 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
LIG1-208ENST00000595758 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
LIG1-208ENST00000595758 CHRNA5P30532 468 aa18.3■□□□□ 0.52
LIG1-208ENST00000595758 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
LIG1-208ENST00000595758 DNAAF4Q8WXU2 420 aa18.3■□□□□ 0.52
LIG1-208ENST00000595758 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
LIG1-208ENST00000595758 PXDNLA1KZ92 1463 aa18.3■□□□□ 0.52
LIG1-208ENST00000595758 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms