RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 CHRNA5P30532 468 aa16.55■□□□□ 0.24
LDLRAD4-219ENST00000593236 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
LDLRAD4-219ENST00000593236 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
LDLRAD4-219ENST00000593236 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
LDLRAD4-219ENST00000593236 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
LDLRAD4-219ENST00000593236 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
LDLRAD4-219ENST00000593236 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
LDLRAD4-219ENST00000593236 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
LDLRAD4-219ENST00000593236 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
LDLRAD4-219ENST00000593236 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
LDLRAD4-219ENST00000593236 APLP1P51693 650 aa16.53■□□□□ 0.24
LDLRAD4-219ENST00000593236 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 ZPR1O75312 459 aa16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 STARD3NLO95772 234 aa16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD4-219ENST00000593236 A1BGP04217 495 aa16.51■□□□□ 0.23
LDLRAD4-219ENST00000593236 HOXB7P09629 217 aa16.51■□□□□ 0.23
LDLRAD4-219ENST00000593236 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
LDLRAD4-219ENST00000593236 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
LDLRAD4-219ENST00000593236 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
LDLRAD4-219ENST00000593236 BCL2L12Q9HB09 334 aa16.5■□□□□ 0.23
LDLRAD4-219ENST00000593236 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
LDLRAD4-219ENST00000593236 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
LDLRAD4-219ENST00000593236 SBF1O95248 1867 aa16.5■□□□□ 0.23
LDLRAD4-219ENST00000593236 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-219ENST00000593236 TCERG1O14776 1098 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-219ENST00000593236 NFIXQ14938 502 aa16.49■□□□□ 0.23
LDLRAD4-219ENST00000593236 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-219ENST00000593236 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD4-219ENST00000593236 VAMP4O75379 141 aa16.48■□□□□ 0.23
LDLRAD4-219ENST00000593236 ANXA1P04083 346 aa16.48■□□□□ 0.23
LDLRAD4-219ENST00000593236 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 COL15A1P39059 1388 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
LDLRAD4-219ENST00000593236 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
LDLRAD4-219ENST00000593236 SERPINB2P05120 415 aa16.46■□□□□ 0.23
LDLRAD4-219ENST00000593236 MYL6BP14649 208 aa16.46■□□□□ 0.23
LDLRAD4-219ENST00000593236 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
LDLRAD4-219ENST00000593236 PRELPP51888 382 aa16.45■□□□□ 0.22
LDLRAD4-219ENST00000593236 RASSF7Q02833 373 aa16.45■□□□□ 0.22
LDLRAD4-219ENST00000593236 PDIA6Q15084 440 aa16.45■□□□□ 0.22
LDLRAD4-219ENST00000593236 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
LDLRAD4-219ENST00000593236 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
LDLRAD4-219ENST00000593236 HTRA3P83110 453 aa16.44■□□□□ 0.22
LDLRAD4-219ENST00000593236 FSTL1Q12841 308 aa16.44■□□□□ 0.22
LDLRAD4-219ENST00000593236 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
LDLRAD4-219ENST00000593236 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
LDLRAD4-219ENST00000593236 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
LDLRAD4-219ENST00000593236 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
LDLRAD4-219ENST00000593236 DDX21Q9NR30 783 aaKnown RBP eCLIP16.43■□□□□ 0.22
LDLRAD4-219ENST00000593236 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
LDLRAD4-219ENST00000593236 DLEC1Q9Y238 1755 aa16.42■□□□□ 0.22
LDLRAD4-219ENST00000593236 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD4-219ENST00000593236 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
LDLRAD4-219ENST00000593236 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
LDLRAD4-219ENST00000593236 TTLL6Q8N841 843 aa16.42■□□□□ 0.22
LDLRAD4-219ENST00000593236 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 SSH1Q8WYL5 1049 aa16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
LDLRAD4-219ENST00000593236 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 H0YIN7 160 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 LMNB1P20700 586 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
LDLRAD4-219ENST00000593236 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.22
LDLRAD4-219ENST00000593236 A0A087WZG4 1122 aa16.39■□□□□ 0.21
LDLRAD4-219ENST00000593236 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
LDLRAD4-219ENST00000593236 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
LDLRAD4-219ENST00000593236 G2E3Q7L622 706 aa16.39■□□□□ 0.21
LDLRAD4-219ENST00000593236 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
LDLRAD4-219ENST00000593236 NFKBIEO00221 500 aa16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
LDLRAD4-219ENST00000593236 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
LDLRAD4-219ENST00000593236 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
LDLRAD4-219ENST00000593236 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
LDLRAD4-219ENST00000593236 CCDC24Q8N4L8 307 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms