RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
MBD1-227ENST00000592060 USP16Q9Y5T5 823 aa19.26■□□□□ 0.67
MBD1-227ENST00000592060 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
MBD1-227ENST00000592060 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
MBD1-227ENST00000592060 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
MBD1-227ENST00000592060 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
MBD1-227ENST00000592060 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
MBD1-227ENST00000592060 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
MBD1-227ENST00000592060 NEURL1BA8MQ27 555 aa19.24■□□□□ 0.67
MBD1-227ENST00000592060 CABP4P57796 275 aa19.24■□□□□ 0.67
MBD1-227ENST00000592060 COPS6Q7L5N1 327 aa19.24■□□□□ 0.67
MBD1-227ENST00000592060 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
MBD1-227ENST00000592060 BICC1Q9H694 974 aaKnown RBP19.24■□□□□ 0.67
MBD1-227ENST00000592060 PA2G4Q9UQ80 394 aaKnown RBP19.24■□□□□ 0.67
MBD1-227ENST00000592060 EPB41L2O43491 1005 aaKnown RBP19.23■□□□□ 0.67
MBD1-227ENST00000592060 ST18O60284 1047 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
MBD1-227ENST00000592060 ERC1Q8IUD2 1116 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 KCPQ6ZWJ8 1503 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 NUP188Q5SRE5 1749 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 IL25Q9H293 177 aa19.23■□□□□ 0.67
MBD1-227ENST00000592060 TOGARAM1Q9Y4F4 1720 aa19.22■□□□□ 0.67
MBD1-227ENST00000592060 ANAPC15P60006 121 aa19.22■□□□□ 0.67
MBD1-227ENST00000592060 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
MBD1-227ENST00000592060 GCKRQ14397 625 aa19.22■□□□□ 0.67
MBD1-227ENST00000592060 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
MBD1-227ENST00000592060 ZCRB1Q8TBF4 217 aaKnown RBP19.22■□□□□ 0.67
MBD1-227ENST00000592060 MYD88Q99836 296 aa19.21■□□□□ 0.67
MBD1-227ENST00000592060 ANO2Q9NQ90 1003 aa19.21■□□□□ 0.67
MBD1-227ENST00000592060 PALD1Q9ULE6 856 aa19.21■□□□□ 0.67
MBD1-227ENST00000592060 MAP4K4O95819 1239 aaPredicted RBP19.21■□□□□ 0.67
MBD1-227ENST00000592060 MCCP23508 829 aa19.21■□□□□ 0.67
MBD1-227ENST00000592060 CLASRPQ8N2M8 674 aaKnown RBP19.21■□□□□ 0.67
MBD1-227ENST00000592060 CARD10Q9BWT7 1032 aa19.21■□□□□ 0.67
MBD1-227ENST00000592060 COL15A1P39059 1388 aa19.2■□□□□ 0.66
MBD1-227ENST00000592060 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
MBD1-227ENST00000592060 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
MBD1-227ENST00000592060 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
MBD1-227ENST00000592060 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
MBD1-227ENST00000592060 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 TNS2Q63HR2 1409 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 SGSM2O43147 1006 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 SASH1O94885 1247 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 PIP4K2AP48426 406 aaPredicted RBP19.19■□□□□ 0.66
MBD1-227ENST00000592060 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 GBP4Q96PP9 640 aa19.19■□□□□ 0.66
MBD1-227ENST00000592060 TJP1Q07157 1748 aa19.18■□□□□ 0.66
MBD1-227ENST00000592060 TRAK2O60296 914 aa19.18■□□□□ 0.66
MBD1-227ENST00000592060 SSFA2P28290 1259 aa19.18■□□□□ 0.66
MBD1-227ENST00000592060 IL2RBP14784 551 aa19.17■□□□□ 0.66
MBD1-227ENST00000592060 EPHA10Q5JZY3 1008 aa19.17■□□□□ 0.66
MBD1-227ENST00000592060 ECHDC1Q9NTX5 307 aa19.17■□□□□ 0.66
MBD1-227ENST00000592060 CYP2E1P05181 493 aaPredicted RBP19.17■□□□□ 0.66
MBD1-227ENST00000592060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.17■□□□□ 0.66
MBD1-227ENST00000592060 RAD50Q92878 1312 aa19.16■□□□□ 0.66
MBD1-227ENST00000592060 HSPA4P34932 840 aa19.16■□□□□ 0.66
MBD1-227ENST00000592060 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
MBD1-227ENST00000592060 IFIT2P09913 472 aaKnown RBP19.15■□□□□ 0.66
MBD1-227ENST00000592060 NEK4P51957 841 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 G3BP1Q13283 466 aaKnown RBP eCLIP19.15■□□□□ 0.66
MBD1-227ENST00000592060 AACSQ86V21 672 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 PLBD2Q8NHP8 589 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
MBD1-227ENST00000592060 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 MCM2P49736 904 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 NBPF14Q5TI25 921 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
MBD1-227ENST00000592060 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
MBD1-227ENST00000592060 LSG1Q9H089 658 aaKnown RBP19.15■□□□□ 0.66
MBD1-227ENST00000592060 RABL6Q3YEC7 729 aaPredicted RBP19.14■□□□□ 0.65
MBD1-227ENST00000592060 EAF2Q96CJ1 260 aaPredicted RBP19.14■□□□□ 0.65
MBD1-227ENST00000592060 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
MBD1-227ENST00000592060 CASP7P55210 303 aa19.13■□□□□ 0.65
MBD1-227ENST00000592060 ZGPATQ8N5A5 531 aaKnown RBP19.13■□□□□ 0.65
MBD1-227ENST00000592060 NUCB2P80303 420 aa19.13■□□□□ 0.65
MBD1-227ENST00000592060 PTMSP20962 102 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 CUL4AQ13619 759 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 KLHDC4Q8TBB5 520 aa19.12■□□□□ 0.65
MBD1-227ENST00000592060 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
MBD1-227ENST00000592060 IL27Q8NEV9 243 aa19.11■□□□□ 0.65
MBD1-227ENST00000592060 EVI5LQ96CN4 794 aa19.11■□□□□ 0.65
MBD1-227ENST00000592060 SIL1Q9H173 461 aa19.11■□□□□ 0.65
MBD1-227ENST00000592060 TLR7Q9NYK1 1049 aaKnown RBP19.11■□□□□ 0.65
MBD1-227ENST00000592060 COL14A1Q05707 1796 aaKnown RBP19.11■□□□□ 0.65
MBD1-227ENST00000592060 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
MBD1-227ENST00000592060 PTCD1O75127 700 aaKnown RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 BAG4O95429 457 aaKnown RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 CWC27Q6UX04 472 aaKnown RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 PLCH1Q4KWH8 1693 aa19.1■□□□□ 0.65
MBD1-227ENST00000592060 FSD2A1L4K1 749 aa19.1■□□□□ 0.65
MBD1-227ENST00000592060 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 CCDC8Q9H0W5 538 aaPredicted RBP19.1■□□□□ 0.65
MBD1-227ENST00000592060 DIAPH3Q9NSV4 1193 aa19.1■□□□□ 0.65
MBD1-227ENST00000592060 ITGB4P16144 1822 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms