RNA–Protein interactions for RNA: ENST00000591265.1

ZNF554-204, Transcript of zinc finger protein 554, humanhuman

TSL 5 BASIC

Gene ZNF554, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-204ENST00000591265 CCDC88AQ3V6T2 1871 aa23.63■■□□□ 1.37
ZNF554-204ENST00000591265 DZIP3Q86Y13 1208 aaKnown RBP23.63■■□□□ 1.37
ZNF554-204ENST00000591265 ZNF219Q9P2Y4 722 aaPredicted RBP23.63■■□□□ 1.37
ZNF554-204ENST00000591265 FER1L6Q2WGJ9 1857 aa23.62■■□□□ 1.37
ZNF554-204ENST00000591265 PPP2R1AP30153 589 aa23.62■■□□□ 1.37
ZNF554-204ENST00000591265 PRPF40BQ6NWY9 871 aaKnown RBP23.62■■□□□ 1.37
ZNF554-204ENST00000591265 PHACTR3Q96KR7 559 aa23.62■■□□□ 1.37
ZNF554-204ENST00000591265 RGL2O15211 777 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 KCNQ3O43525 872 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 TNS4Q8IZW8 715 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 RSPH6AQ9H0K4 717 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 ZNF652Q9Y2D9 606 aa23.61■■□□□ 1.37
ZNF554-204ENST00000591265 COL11A2P13942 1736 aaPredicted RBP23.6■■□□□ 1.37
ZNF554-204ENST00000591265 CHADLQ6NUI6 762 aa23.6■■□□□ 1.37
ZNF554-204ENST00000591265 USP16Q9Y5T5 823 aa23.6■■□□□ 1.37
ZNF554-204ENST00000591265 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
ZNF554-204ENST00000591265 SNRPA1P09661 255 aaKnown RBP23.59■■□□□ 1.37
ZNF554-204ENST00000591265 HSPA1AP0DMV8 641 aaKnown RBP23.59■■□□□ 1.37
ZNF554-204ENST00000591265 HSPA1BP0DMV9 641 aaKnown RBP23.59■■□□□ 1.37
ZNF554-204ENST00000591265 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
ZNF554-204ENST00000591265 NUDCQ9Y266 331 aa23.59■■□□□ 1.37
ZNF554-204ENST00000591265 NBPF5PQ86XG9 351 aaPredicted RBP23.58■■□□□ 1.37
ZNF554-204ENST00000591265 KLRG2A4D1S0 409 aaPredicted RBP23.57■■□□□ 1.36
ZNF554-204ENST00000591265 IQCA1LA6NCM1 817 aa23.57■■□□□ 1.36
ZNF554-204ENST00000591265 DDNO94850 711 aaPredicted RBP23.57■■□□□ 1.36
ZNF554-204ENST00000591265 C7orf43Q8WVR3 580 aa23.57■■□□□ 1.36
ZNF554-204ENST00000591265 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
ZNF554-204ENST00000591265 NPR1P16066 1061 aa23.56■■□□□ 1.36
ZNF554-204ENST00000591265 TPTE2Q6XPS3 522 aa23.56■■□□□ 1.36
ZNF554-204ENST00000591265 BCORQ6W2J9 1755 aa23.55■■□□□ 1.36
ZNF554-204ENST00000591265 SLX4Q8IY92 1834 aa23.55■■□□□ 1.36
ZNF554-204ENST00000591265 HTATSF1O43719 755 aaKnown RBP23.55■■□□□ 1.36
ZNF554-204ENST00000591265 CCDC93Q567U6 631 aa23.55■■□□□ 1.36
ZNF554-204ENST00000591265 L3MBTL3Q96JM7 780 aaPredicted RBP23.55■■□□□ 1.36
ZNF554-204ENST00000591265 ARFGEF2Q9Y6D5 1785 aa23.53■■□□□ 1.36
ZNF554-204ENST00000591265 PRAMEF22A3QJZ6 481 aa23.52■■□□□ 1.36
ZNF554-204ENST00000591265 PIP4K2AP48426 406 aaPredicted RBP23.52■■□□□ 1.36
ZNF554-204ENST00000591265 LDHDQ86WU2 507 aa23.52■■□□□ 1.36
ZNF554-204ENST00000591265 U2AF1L5P0DN76 240 aaPredicted RBP23.51■■□□□ 1.35
ZNF554-204ENST00000591265 U2AF1Q01081 240 aaKnown RBP eCLIP23.51■■□□□ 1.35
ZNF554-204ENST00000591265 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
ZNF554-204ENST00000591265 MCM10Q7L590 875 aa23.51■■□□□ 1.35
ZNF554-204ENST00000591265 RTKN2Q8IZC4 609 aa23.51■■□□□ 1.35
ZNF554-204ENST00000591265 NIP7Q9Y221 180 aaKnown RBP eCLIP23.51■■□□□ 1.35
ZNF554-204ENST00000591265 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
ZNF554-204ENST00000591265 POTEIP0CG38 1075 aa23.5■■□□□ 1.35
ZNF554-204ENST00000591265 POTEJP0CG39 1038 aa23.5■■□□□ 1.35
ZNF554-204ENST00000591265 ALDH1B1P30837 517 aa23.5■■□□□ 1.35
ZNF554-204ENST00000591265 TAF1DQ9H5J8 278 aaPredicted RBP23.5■■□□□ 1.35
ZNF554-204ENST00000591265 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
ZNF554-204ENST00000591265 CAPN15O75808 1086 aa23.49■■□□□ 1.35
ZNF554-204ENST00000591265 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
ZNF554-204ENST00000591265 NBPF15Q8N660 670 aa23.49■■□□□ 1.35
ZNF554-204ENST00000591265 PASKQ96RG2 1323 aa23.49■■□□□ 1.35
ZNF554-204ENST00000591265 TAF7Q15545 349 aaPredicted RBP23.48■■□□□ 1.35
ZNF554-204ENST00000591265 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
ZNF554-204ENST00000591265 MKRN1Q9UHC7 482 aaKnown RBP23.48■■□□□ 1.35
ZNF554-204ENST00000591265 SCN4AP35499 1836 aa23.47■■□□□ 1.35
ZNF554-204ENST00000591265 CNTNAP1P78357 1384 aa23.46■■□□□ 1.35
ZNF554-204ENST00000591265 ZNF277Q9NRM2 450 aaPredicted RBP23.46■■□□□ 1.35
ZNF554-204ENST00000591265 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
ZNF554-204ENST00000591265 HACL1Q9UJ83 578 aa23.45■■□□□ 1.34
ZNF554-204ENST00000591265 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
ZNF554-204ENST00000591265 GTF2E1P29083 439 aaPredicted RBP23.44■■□□□ 1.34
ZNF554-204ENST00000591265 PNMA8AQ86V59 439 aaPredicted RBP23.44■■□□□ 1.34
ZNF554-204ENST00000591265 NYXQ9GZU5 481 aa23.44■■□□□ 1.34
ZNF554-204ENST00000591265 CACNA1SQ13698 1873 aa23.44■■□□□ 1.34
ZNF554-204ENST00000591265 TMEM88BA6NKF7 163 aa23.43■■□□□ 1.34
ZNF554-204ENST00000591265 ERVV-1B6SEH8 477 aa23.43■■□□□ 1.34
ZNF554-204ENST00000591265 FZD9O00144 591 aa23.43■■□□□ 1.34
ZNF554-204ENST00000591265 HLFQ16534 295 aa23.43■■□□□ 1.34
ZNF554-204ENST00000591265 PNISRQ8TF01 805 aaKnown RBP23.43■■□□□ 1.34
ZNF554-204ENST00000591265 ZNF541Q9H0D2 1346 aa23.42■■□□□ 1.34
ZNF554-204ENST00000591265 IARSP41252 1262 aaKnown RBP23.42■■□□□ 1.34
ZNF554-204ENST00000591265 CRY2Q49AN0 593 aa23.42■■□□□ 1.34
ZNF554-204ENST00000591265 CC2D2BQ6DHV5 1058 aa23.42■■□□□ 1.34
ZNF554-204ENST00000591265 SYNE4Q8N205 404 aa23.42■■□□□ 1.34
ZNF554-204ENST00000591265 PSMD1Q99460 953 aa23.42■■□□□ 1.34
ZNF554-204ENST00000591265 FAM177BA6PVY3 158 aa23.41■■□□□ 1.34
ZNF554-204ENST00000591265 EPHX2P34913 555 aa23.41■■□□□ 1.34
ZNF554-204ENST00000591265 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
ZNF554-204ENST00000591265 GPC2Q8N158 579 aa23.41■■□□□ 1.34
ZNF554-204ENST00000591265 EAPPQ56P03 285 aaPredicted RBP23.4■■□□□ 1.34
ZNF554-204ENST00000591265 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
ZNF554-204ENST00000591265 PRDM10Q9NQV6 1147 aa23.4■■□□□ 1.34
ZNF554-204ENST00000591265 ANP32CO43423 234 aa23.39■■□□□ 1.33
ZNF554-204ENST00000591265 NEFMP07197 916 aa23.39■■□□□ 1.33
ZNF554-204ENST00000591265 JDP2Q8WYK2 163 aa23.39■■□□□ 1.33
ZNF554-204ENST00000591265 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
ZNF554-204ENST00000591265 CLEC11AQ9Y240 323 aa23.39■■□□□ 1.33
ZNF554-204ENST00000591265 MIS18AQ9NYP9 233 aa23.38■■□□□ 1.33
ZNF554-204ENST00000591265 MAP3K15Q6ZN16 1313 aa23.37■■□□□ 1.33
ZNF554-204ENST00000591265 SNED1Q8TER0 1413 aa23.37■■□□□ 1.33
ZNF554-204ENST00000591265 FOXN1O15353 648 aa23.37■■□□□ 1.33
ZNF554-204ENST00000591265 HOXA10P31260 410 aaPredicted RBP23.37■■□□□ 1.33
ZNF554-204ENST00000591265 VEGFBP49765 207 aa23.37■■□□□ 1.33
ZNF554-204ENST00000591265 IBTKQ9P2D0 1353 aaPredicted RBP23.37■■□□□ 1.33
ZNF554-204ENST00000591265 RIC1Q4ADV7 1423 aa23.36■■□□□ 1.33
ZNF554-204ENST00000591265 CTCFP49711 727 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms