RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 OLFM4Q6UX06 510 aa19.81■□□□□ 0.76
ERCC1-211ENST00000590701 LDHDQ86WU2 507 aa19.81■□□□□ 0.76
ERCC1-211ENST00000590701 C7orf43Q8WVR3 580 aa19.81■□□□□ 0.76
ERCC1-211ENST00000590701 TEX13AQ9BXU3 409 aaPredicted RBP19.81■□□□□ 0.76
ERCC1-211ENST00000590701 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
ERCC1-211ENST00000590701 LBX1P52954 281 aa19.8■□□□□ 0.76
ERCC1-211ENST00000590701 ST5P78524 1137 aa19.8■□□□□ 0.76
ERCC1-211ENST00000590701 TEFQ10587 303 aa19.8■□□□□ 0.76
ERCC1-211ENST00000590701 CLEC11AQ9Y240 323 aa19.8■□□□□ 0.76
ERCC1-211ENST00000590701 SCN4AP35499 1836 aa19.79■□□□□ 0.76
ERCC1-211ENST00000590701 SCN7AQ01118 1682 aa19.79■□□□□ 0.76
ERCC1-211ENST00000590701 IQCA1LA6NCM1 817 aa19.79■□□□□ 0.76
ERCC1-211ENST00000590701 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
ERCC1-211ENST00000590701 AIDAQ96BJ3 306 aa19.79■□□□□ 0.76
ERCC1-211ENST00000590701 L3MBTL3Q96JM7 780 aaPredicted RBP19.79■□□□□ 0.76
ERCC1-211ENST00000590701 WBP1LQ9NX94 342 aa19.79■□□□□ 0.76
ERCC1-211ENST00000590701 ZNF541Q9H0D2 1346 aa19.78■□□□□ 0.76
ERCC1-211ENST00000590701 PCGF6Q9BYE7 350 aa19.78■□□□□ 0.76
ERCC1-211ENST00000590701 ZNF277Q9NRM2 450 aaPredicted RBP19.78■□□□□ 0.76
ERCC1-211ENST00000590701 USP16Q9Y5T5 823 aa19.78■□□□□ 0.76
ERCC1-211ENST00000590701 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
ERCC1-211ENST00000590701 SOGA3Q5TF21 947 aa19.77■□□□□ 0.76
ERCC1-211ENST00000590701 NPM2Q86SE8 214 aaKnown RBP19.77■□□□□ 0.76
ERCC1-211ENST00000590701 DZIP3Q86Y13 1208 aaKnown RBP19.77■□□□□ 0.76
ERCC1-211ENST00000590701 ARFGEF2Q9Y6D5 1785 aa19.76■□□□□ 0.75
ERCC1-211ENST00000590701 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
ERCC1-211ENST00000590701 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
ERCC1-211ENST00000590701 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-211ENST00000590701 PRAMEF22A3QJZ6 481 aa19.75■□□□□ 0.75
ERCC1-211ENST00000590701 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
ERCC1-211ENST00000590701 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-211ENST00000590701 DEFB115Q30KQ5 88 aa19.75■□□□□ 0.75
ERCC1-211ENST00000590701 CCDC93Q567U6 631 aa19.75■□□□□ 0.75
ERCC1-211ENST00000590701 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-211ENST00000590701 NBPF5PQ86XG9 351 aaPredicted RBP19.75■□□□□ 0.75
ERCC1-211ENST00000590701 HACL1Q9UJ83 578 aa19.75■□□□□ 0.75
ERCC1-211ENST00000590701 FAM177BA6PVY3 158 aa19.74■□□□□ 0.75
ERCC1-211ENST00000590701 EPHX2P34913 555 aa19.74■□□□□ 0.75
ERCC1-211ENST00000590701 CNTROBQ8N137 903 aa19.74■□□□□ 0.75
ERCC1-211ENST00000590701 NPR1P16066 1061 aa19.73■□□□□ 0.75
ERCC1-211ENST00000590701 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
ERCC1-211ENST00000590701 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
ERCC1-211ENST00000590701 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
ERCC1-211ENST00000590701 HSPA8P11142 646 aaKnown RBP19.72■□□□□ 0.75
ERCC1-211ENST00000590701 SYNE4Q8N205 404 aa19.72■□□□□ 0.75
ERCC1-211ENST00000590701 ABHD8Q96I13 439 aa19.72■□□□□ 0.75
ERCC1-211ENST00000590701 BCORQ6W2J9 1755 aa19.71■□□□□ 0.75
ERCC1-211ENST00000590701 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
ERCC1-211ENST00000590701 FMR1Q06787 632 aaKnown RBP eCLIP19.71■□□□□ 0.75
ERCC1-211ENST00000590701 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
ERCC1-211ENST00000590701 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
ERCC1-211ENST00000590701 WDR33Q9C0J8 1336 aaKnown RBP19.71■□□□□ 0.75
ERCC1-211ENST00000590701 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
ERCC1-211ENST00000590701 RASSF10A6NK89 507 aa19.7■□□□□ 0.74
ERCC1-211ENST00000590701 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
ERCC1-211ENST00000590701 FZD9O00144 591 aa19.69■□□□□ 0.74
ERCC1-211ENST00000590701 FAM161AQ3B820 660 aa19.69■□□□□ 0.74
ERCC1-211ENST00000590701 CLEC4GQ6UXB4 293 aa19.69■□□□□ 0.74
ERCC1-211ENST00000590701 TPTE2Q6XPS3 522 aa19.69■□□□□ 0.74
ERCC1-211ENST00000590701 RTKN2Q8IZC4 609 aa19.69■□□□□ 0.74
ERCC1-211ENST00000590701 ABT1Q9ULW3 272 aaKnown RBP19.69■□□□□ 0.74
ERCC1-211ENST00000590701 IARSP41252 1262 aaKnown RBP19.68■□□□□ 0.74
ERCC1-211ENST00000590701 PNMA8AQ86V59 439 aaPredicted RBP19.68■□□□□ 0.74
ERCC1-211ENST00000590701 NIP7Q9Y221 180 aaKnown RBP eCLIP19.68■□□□□ 0.74
ERCC1-211ENST00000590701 NBPF26B4DH59 902 aa19.67■□□□□ 0.74
ERCC1-211ENST00000590701 HLFQ16534 295 aa19.67■□□□□ 0.74
ERCC1-211ENST00000590701 NBPF10Q6P3W6 841 aaKnown RBP19.67■□□□□ 0.74
ERCC1-211ENST00000590701 NBPF15Q8N660 670 aa19.67■□□□□ 0.74
ERCC1-211ENST00000590701 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
ERCC1-211ENST00000590701 SLC34A2O95436 690 aa19.66■□□□□ 0.74
ERCC1-211ENST00000590701 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
ERCC1-211ENST00000590701 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
ERCC1-211ENST00000590701 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
ERCC1-211ENST00000590701 ALDH1B1P30837 517 aa19.65■□□□□ 0.74
ERCC1-211ENST00000590701 GPC2Q8N158 579 aa19.65■□□□□ 0.74
ERCC1-211ENST00000590701 DDX21Q9NR30 783 aaKnown RBP eCLIP19.65■□□□□ 0.74
ERCC1-211ENST00000590701 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
ERCC1-211ENST00000590701 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
ERCC1-211ENST00000590701 GRM1Q13255 1194 aa19.64■□□□□ 0.73
ERCC1-211ENST00000590701 CLSPNQ9HAW4 1339 aa19.64■□□□□ 0.73
ERCC1-211ENST00000590701 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.73
ERCC1-211ENST00000590701 CCDC85CA6NKD9 419 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
ERCC1-211ENST00000590701 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 EPS15P42566 896 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 PAXIP1Q6ZW49 1069 aaPredicted RBP19.63■□□□□ 0.73
ERCC1-211ENST00000590701 MCM10Q7L590 875 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 SLC51AQ86UW1 340 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
ERCC1-211ENST00000590701 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
ERCC1-211ENST00000590701 CYP4F22Q6NT55 531 aa19.62■□□□□ 0.73
ERCC1-211ENST00000590701 CAPNS2Q96L46 248 aa19.62■□□□□ 0.73
ERCC1-211ENST00000590701 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
ERCC1-211ENST00000590701 COL4A5P29400 1685 aa19.62■□□□□ 0.73
ERCC1-211ENST00000590701 EIF6P56537 245 aaKnown RBP19.61■□□□□ 0.73
ERCC1-211ENST00000590701 CST9Q5W186 159 aa19.61■□□□□ 0.73
ERCC1-211ENST00000590701 NUTM1Q86Y26 1132 aa19.61■□□□□ 0.73
ERCC1-211ENST00000590701 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
ERCC1-211ENST00000590701 TSKSQ9UJT2 592 aa19.61■□□□□ 0.73
ERCC1-211ENST00000590701 TRAF5O00463 557 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms