RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
DDX39A-213ENST00000590315 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
DDX39A-213ENST00000590315 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
DDX39A-213ENST00000590315 MTFR1LQ9H019 292 aa16.46■□□□□ 0.23
DDX39A-213ENST00000590315 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
DDX39A-213ENST00000590315 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
DDX39A-213ENST00000590315 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
DDX39A-213ENST00000590315 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-213ENST00000590315 CAMTA2O94983 1202 aa16.44■□□□□ 0.22
DDX39A-213ENST00000590315 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
DDX39A-213ENST00000590315 GYS1P13807 737 aa16.44■□□□□ 0.22
DDX39A-213ENST00000590315 POLD1P28340 1107 aa16.44■□□□□ 0.22
DDX39A-213ENST00000590315 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-213ENST00000590315 RIC3Q7Z5B4 369 aa16.44■□□□□ 0.22
DDX39A-213ENST00000590315 NPHP1O15259 732 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 FKBP8Q14318 412 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 G2E3Q7L622 706 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
DDX39A-213ENST00000590315 LRP5O75197 1615 aa16.42■□□□□ 0.22
DDX39A-213ENST00000590315 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-213ENST00000590315 FLIIQ13045 1269 aa16.42■□□□□ 0.22
DDX39A-213ENST00000590315 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
DDX39A-213ENST00000590315 LRP10Q7Z4F1 713 aa16.42■□□□□ 0.22
DDX39A-213ENST00000590315 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
DDX39A-213ENST00000590315 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 MMP10P09238 476 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 HLFQ16534 295 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
DDX39A-213ENST00000590315 PLBD2Q8NHP8 589 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-213ENST00000590315 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
DDX39A-213ENST00000590315 ERVV-1B6SEH8 477 aa16.4■□□□□ 0.22
DDX39A-213ENST00000590315 GPTP24298 496 aa16.4■□□□□ 0.22
DDX39A-213ENST00000590315 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
DDX39A-213ENST00000590315 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
DDX39A-213ENST00000590315 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDX39A-213ENST00000590315 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
DDX39A-213ENST00000590315 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
DDX39A-213ENST00000590315 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
DDX39A-213ENST00000590315 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-213ENST00000590315 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
DDX39A-213ENST00000590315 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
DDX39A-213ENST00000590315 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 NFIXQ14938 502 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 MYD88Q99836 296 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 MYH3P11055 1940 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 NRXN2Q9P2S2 1712 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
DDX39A-213ENST00000590315 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 LAMB2P55268 1798 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 BCAR3O75815 825 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 ADCY9O60503 1353 aa16.37■□□□□ 0.21
DDX39A-213ENST00000590315 F6X3S4 739 aa16.36■□□□□ 0.21
DDX39A-213ENST00000590315 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
DDX39A-213ENST00000590315 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
DDX39A-213ENST00000590315 DDR1Q08345 913 aa16.36■□□□□ 0.21
DDX39A-213ENST00000590315 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
DDX39A-213ENST00000590315 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
DDX39A-213ENST00000590315 PTPRCP08575 1304 aa16.36■□□□□ 0.21
DDX39A-213ENST00000590315 SERPINB2P05120 415 aa16.35■□□□□ 0.21
DDX39A-213ENST00000590315 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
DDX39A-213ENST00000590315 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-213ENST00000590315 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
DDX39A-213ENST00000590315 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
DDX39A-213ENST00000590315 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
DDX39A-213ENST00000590315 RGL2O15211 777 aa16.34■□□□□ 0.21
DDX39A-213ENST00000590315 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-213ENST00000590315 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
DDX39A-213ENST00000590315 TM4SF1P30408 202 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 PTGER2P43116 358 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 ST5P78524 1137 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 PARP10Q53GL7 1025 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
DDX39A-213ENST00000590315 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
DDX39A-213ENST00000590315 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-213ENST00000590315 PXDNLA1KZ92 1463 aa16.32■□□□□ 0.2
DDX39A-213ENST00000590315 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
DDX39A-213ENST00000590315 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
DDX39A-213ENST00000590315 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
DDX39A-213ENST00000590315 DLEC1Q9Y238 1755 aa16.32■□□□□ 0.2
DDX39A-213ENST00000590315 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
DDX39A-213ENST00000590315 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
DDX39A-213ENST00000590315 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-213ENST00000590315 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms