RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RGL2O15211 777 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 TM4SF1P30408 202 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 NFIXQ14938 502 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 BICDL1Q6ZP65 573 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 LRP10Q7Z4F1 713 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 HYPKQ9NX55 129 aa27.45■■□□□ 1.98
ATG4D-212ENST00000590096 MAP3K15Q6ZN16 1313 aa27.44■■□□□ 1.98
ATG4D-212ENST00000590096 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
ATG4D-212ENST00000590096 DDR1Q08345 913 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 SLFN5Q08AF3 891 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 AIMP1Q12904 312 aaKnown RBP27.43■■□□□ 1.98
ATG4D-212ENST00000590096 TBC1D9BQ66K14 1250 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 COPS6Q7L5N1 327 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 XAGE3Q8WTP9 111 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 STK31Q9BXU1 1019 aa27.43■■□□□ 1.98
ATG4D-212ENST00000590096 POLRMTO00411 1230 aaKnown RBP27.42■■□□□ 1.98
ATG4D-212ENST00000590096 SYT17Q9BSW7 474 aa27.42■■□□□ 1.98
ATG4D-212ENST00000590096 ZBTB3Q9H5J0 574 aa27.42■■□□□ 1.98
ATG4D-212ENST00000590096 SETDB2Q96T68 719 aa27.41■■□□□ 1.98
ATG4D-212ENST00000590096 HLFQ16534 295 aa27.4■■□□□ 1.98
ATG4D-212ENST00000590096 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
ATG4D-212ENST00000590096 CD2APQ9Y5K6 639 aa27.4■■□□□ 1.98
ATG4D-212ENST00000590096 NUP98P52948 1817 aa27.39■■□□□ 1.98
ATG4D-212ENST00000590096 CARMIL3Q8ND23 1372 aa27.39■■□□□ 1.98
ATG4D-212ENST00000590096 VAMP4O75379 141 aa27.39■■□□□ 1.98
ATG4D-212ENST00000590096 SERPINB2P05120 415 aa27.38■■□□□ 1.97
ATG4D-212ENST00000590096 NIP7Q9Y221 180 aaKnown RBP eCLIP27.38■■□□□ 1.97
ATG4D-212ENST00000590096 AFDNP55196 1824 aaKnown RBP27.37■■□□□ 1.97
ATG4D-212ENST00000590096 C10orf71Q711Q0 1435 aa27.36■■□□□ 1.97
ATG4D-212ENST00000590096 TCERG1O14776 1098 aaKnown RBP27.36■■□□□ 1.97
ATG4D-212ENST00000590096 GIGYF2Q6Y7W6 1299 aaKnown RBP27.36■■□□□ 1.97
ATG4D-212ENST00000590096 NPHP1O15259 732 aa27.35■■□□□ 1.97
ATG4D-212ENST00000590096 PHAXQ9H814 394 aaKnown RBP27.35■■□□□ 1.97
ATG4D-212ENST00000590096 ATP10DQ9P241 1426 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 NRXN2Q9P2S2 1712 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 SLC4A2P04920 1241 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 HSP90AB3PQ58FF7 597 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 ANKRD13DQ6ZTN6 518 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 PLBD2Q8NHP8 589 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 KIF13BQ9NQT8 1826 aa27.34■■□□□ 1.97
ATG4D-212ENST00000590096 TRMT2AQ8IZ69 625 aaKnown RBP27.33■■□□□ 1.97
ATG4D-212ENST00000590096 NLGN2Q8NFZ4 835 aa27.33■■□□□ 1.97
ATG4D-212ENST00000590096 CACNA1FO60840 1977 aa27.33■■□□□ 1.97
ATG4D-212ENST00000590096 NBPF5PQ86XG9 351 aaPredicted RBP27.32■■□□□ 1.96
ATG4D-212ENST00000590096 ZBED9Q6R2W3 1325 aa27.32■■□□□ 1.96
ATG4D-212ENST00000590096 DDX58O95786 925 aaKnown RBP27.31■■□□□ 1.96
ATG4D-212ENST00000590096 GPTP24298 496 aa27.31■■□□□ 1.96
ATG4D-212ENST00000590096 CNBD1Q8NA66 436 aa27.31■■□□□ 1.96
ATG4D-212ENST00000590096 RIC3Q7Z5B4 369 aa27.3■■□□□ 1.96
ATG4D-212ENST00000590096 ANKRD36CQ5JPF3 1778 aa27.3■■□□□ 1.96
ATG4D-212ENST00000590096 FAM177BA6PVY3 158 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 YY1P25490 414 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 ST5P78524 1137 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 PRR5LQ6MZQ0 368 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 TPTE2Q6XPS3 522 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 ZNF34Q8IZ26 560 aa27.29■■□□□ 1.96
ATG4D-212ENST00000590096 ARFGEF2Q9Y6D5 1785 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 TGFB2P61812 414 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 TCIRG1Q13488 830 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 PARP10Q53GL7 1025 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 NYXQ9GZU5 481 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 UTRNP46939 3433 aa27.28■■□□□ 1.96
ATG4D-212ENST00000590096 UBN2Q6ZU65 1347 aa27.26■■□□□ 1.95
ATG4D-212ENST00000590096 DCAF8L1A6NGE4 600 aa27.26■■□□□ 1.95
ATG4D-212ENST00000590096 GTF2E1P29083 439 aaPredicted RBP27.26■■□□□ 1.95
ATG4D-212ENST00000590096 FLIIQ13045 1269 aa27.26■■□□□ 1.95
ATG4D-212ENST00000590096 ZNF428Q96B54 188 aa27.26■■□□□ 1.95
ATG4D-212ENST00000590096 CT47B1P0C2W7 299 aaPredicted RBP27.25■■□□□ 1.95
ATG4D-212ENST00000590096 G2E3Q7L622 706 aa27.25■■□□□ 1.95
ATG4D-212ENST00000590096 PPP1R42Q7Z4L9 355 aa27.25■■□□□ 1.95
ATG4D-212ENST00000590096 PXDNLA1KZ92 1463 aa27.25■■□□□ 1.95
ATG4D-212ENST00000590096 IBTKQ9P2D0 1353 aaPredicted RBP27.24■■□□□ 1.95
ATG4D-212ENST00000590096 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
ATG4D-212ENST00000590096 FKBP5Q13451 457 aaPredicted RBP27.23■■□□□ 1.95
ATG4D-212ENST00000590096 SUSD4Q5VX71 490 aa27.23■■□□□ 1.95
ATG4D-212ENST00000590096 KSR2Q6VAB6 950 aa27.23■■□□□ 1.95
ATG4D-212ENST00000590096 CCDC24Q8N4L8 307 aa27.23■■□□□ 1.95
ATG4D-212ENST00000590096 BRIP1Q9BX63 1249 aa27.23■■□□□ 1.95
ATG4D-212ENST00000590096 KIAA1551Q9HCM1 1747 aa27.22■■□□□ 1.95
ATG4D-212ENST00000590096 A0A0G2JLW4 131 aa27.22■■□□□ 1.95
ATG4D-212ENST00000590096 DPEP1P16444 411 aa27.22■■□□□ 1.95
ATG4D-212ENST00000590096 MAP3K2Q9Y2U5 619 aa27.22■■□□□ 1.95
ATG4D-212ENST00000590096 PI4KAP2A4QPH2 592 aa27.21■■□□□ 1.95
ATG4D-212ENST00000590096 PDE6BP35913 854 aa27.21■■□□□ 1.95
ATG4D-212ENST00000590096 NLRP10Q86W26 655 aa27.21■■□□□ 1.95
ATG4D-212ENST00000590096 PELP1Q8IZL8 1130 aaKnown RBP27.21■■□□□ 1.95
ATG4D-212ENST00000590096 PI4KAP1Q8N8J0 262 aa27.21■■□□□ 1.95
ATG4D-212ENST00000590096 UTP14AQ9BVJ6 771 aaKnown RBP27.21■■□□□ 1.95
ATG4D-212ENST00000590096 ANKRD31Q8N7Z5 1873 aa27.21■■□□□ 1.95
ATG4D-212ENST00000590096 ATP5J2-PTCD1G3V325 749 aa27.2■■□□□ 1.94
ATG4D-212ENST00000590096 MYD88Q99836 296 aa27.2■■□□□ 1.94
ATG4D-212ENST00000590096 ISCA1Q9BUE6 129 aa27.2■■□□□ 1.94
ATG4D-212ENST00000590096 METTL22Q9BUU2 404 aaPredicted RBP27.2■■□□□ 1.94
ATG4D-212ENST00000590096 PDZRN3Q9UPQ7 1066 aa27.2■■□□□ 1.94
ATG4D-212ENST00000590096 NTSR2O95665 410 aa27.19■■□□□ 1.94
ATG4D-212ENST00000590096 GPR162Q16538 588 aa27.19■■□□□ 1.94
ATG4D-212ENST00000590096 ALDH1L2Q3SY69 923 aa27.19■■□□□ 1.94
ATG4D-212ENST00000590096 NUTM1Q86Y26 1132 aa27.19■■□□□ 1.94
ATG4D-212ENST00000590096 ADCY9O60503 1353 aa27.19■■□□□ 1.94
ATG4D-212ENST00000590096 H0YIN7 160 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms