RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 PDZRN3Q9UPQ7 1066 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 DLEC1Q9Y238 1755 aa10.92□□□□□ -0.66
VAT1-207ENST00000589828 CCDC85CA6NKD9 419 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 EPHX2P34913 555 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 MLLT1Q03111 559 aaPredicted RBP10.91□□□□□ -0.66
VAT1-207ENST00000589828 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.662e-8■□□□□ 11.3
VAT1-207ENST00000589828 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 CNTROBQ8N137 903 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 CNKSR1Q969H4 720 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 CLEC11AQ9Y240 323 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 MRC1P22897 1456 aa10.91□□□□□ -0.66
VAT1-207ENST00000589828 A0A087WZG4 1122 aa10.9□□□□□ -0.66
VAT1-207ENST00000589828 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
VAT1-207ENST00000589828 MASTLQ96GX5 879 aa10.9□□□□□ -0.66
VAT1-207ENST00000589828 PANK3Q9H999 370 aa10.9□□□□□ -0.66
VAT1-207ENST00000589828 ZNF277Q9NRM2 450 aaPredicted RBP10.9□□□□□ -0.66
VAT1-207ENST00000589828 HACL1Q9UJ83 578 aa10.9□□□□□ -0.66
VAT1-207ENST00000589828 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
VAT1-207ENST00000589828 STARD3NLO95772 234 aa10.89□□□□□ -0.67
VAT1-207ENST00000589828 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
VAT1-207ENST00000589828 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
VAT1-207ENST00000589828 MORC1Q86VD1 984 aa10.89□□□□□ -0.67
VAT1-207ENST00000589828 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
VAT1-207ENST00000589828 ZNF496Q96IT1 587 aaPredicted RBP10.89□□□□□ -0.67
VAT1-207ENST00000589828 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
VAT1-207ENST00000589828 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
VAT1-207ENST00000589828 RNF123Q5XPI4 1314 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 A1BGP04217 495 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 HMOX1P09601 288 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 COL11A2P13942 1736 aaPredicted RBP10.88□□□□□ -0.67
VAT1-207ENST00000589828 FKBP4Q02790 459 aaKnown RBP eCLIP10.88□□□□□ -0.67
VAT1-207ENST00000589828 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
VAT1-207ENST00000589828 FER1L6Q2WGJ9 1857 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 CCDC88AQ3V6T2 1871 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 CCDC93Q567U6 631 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.67
VAT1-207ENST00000589828 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
VAT1-207ENST00000589828 ABT1Q9ULW3 272 aaKnown RBP10.88□□□□□ -0.67
VAT1-207ENST00000589828 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
VAT1-207ENST00000589828 FZD9O00144 591 aa10.87□□□□□ -0.67
VAT1-207ENST00000589828 CYP4F22Q6NT55 531 aa10.87□□□□□ -0.67
VAT1-207ENST00000589828 CAPNS2Q96L46 248 aa10.87□□□□□ -0.67
VAT1-207ENST00000589828 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
VAT1-207ENST00000589828 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
VAT1-207ENST00000589828 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
VAT1-207ENST00000589828 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
VAT1-207ENST00000589828 IL6STP40189 918 aaPredicted RBP10.86□□□□□ -0.67
VAT1-207ENST00000589828 ST5P78524 1137 aa10.86□□□□□ -0.67
VAT1-207ENST00000589828 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
VAT1-207ENST00000589828 VIRMAQ69YN4 1812 aaKnown RBP10.86□□□□□ -0.67
VAT1-207ENST00000589828 NPHP1O15259 732 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 KCNQ3O43525 872 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 AOC2O75106 756 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 NPR1P16066 1061 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 PIP4K2AP48426 406 aaPredicted RBP10.85□□□□□ -0.67
VAT1-207ENST00000589828 GRM1Q13255 1194 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 CST9Q5W186 159 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 PNMA8AQ86V59 439 aaPredicted RBP10.85□□□□□ -0.67
VAT1-207ENST00000589828 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 GPR101Q96P66 508 aaPredicted RBP10.85□□□□□ -0.67
VAT1-207ENST00000589828 MCOLN1Q9GZU1 580 aa10.85□□□□□ -0.67
VAT1-207ENST00000589828 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
VAT1-207ENST00000589828 TRAF5O00463 557 aa10.84□□□□□ -0.67
VAT1-207ENST00000589828 IARSP41252 1262 aaKnown RBP10.84□□□□□ -0.67
VAT1-207ENST00000589828 SLC51AQ86UW1 340 aa10.84□□□□□ -0.67
VAT1-207ENST00000589828 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
VAT1-207ENST00000589828 EPS15P42566 896 aa10.83□□□□□ -0.68
VAT1-207ENST00000589828 PAXIP1Q6ZW49 1069 aaPredicted RBP10.83□□□□□ -0.68
VAT1-207ENST00000589828 NBPF5PQ86XG9 351 aaPredicted RBP10.83□□□□□ -0.68
VAT1-207ENST00000589828 GPC2Q8N158 579 aa10.83□□□□□ -0.68
VAT1-207ENST00000589828 TEX13AQ9BXU3 409 aaPredicted RBP10.83□□□□□ -0.68
VAT1-207ENST00000589828 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
VAT1-207ENST00000589828 SNED1Q8TER0 1413 aa10.83□□□□□ -0.68
VAT1-207ENST00000589828 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 SCNN1DP51172 638 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 RTKN2Q8IZC4 609 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 COL4A5P29400 1685 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 SCN7AQ01118 1682 aa10.82□□□□□ -0.68
VAT1-207ENST00000589828 SCN4AP35499 1836 aa10.81□□□□□ -0.68
VAT1-207ENST00000589828 ECE1P42892 770 aa10.81□□□□□ -0.68
VAT1-207ENST00000589828 AMER1Q5JTC6 1135 aaPredicted RBP10.81□□□□□ -0.68
VAT1-207ENST00000589828 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
VAT1-207ENST00000589828 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
VAT1-207ENST00000589828 BEGAINQ9BUH8 593 aa10.81□□□□□ -0.68
VAT1-207ENST00000589828 FAM177BA6PVY3 158 aa10.8□□□□□ -0.68
VAT1-207ENST00000589828 HSPA5P11021 654 aaKnown RBP10.8□□□□□ -0.68
VAT1-207ENST00000589828 TEFQ10587 303 aa10.8□□□□□ -0.68
VAT1-207ENST00000589828 CLEC4GQ6UXB4 293 aa10.8□□□□□ -0.68
VAT1-207ENST00000589828 PSMD1Q99460 953 aa10.8□□□□□ -0.68
VAT1-207ENST00000589828 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
VAT1-207ENST00000589828 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
VAT1-207ENST00000589828 MAP2K2P36507 400 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms