RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
VPS25-203ENST00000589520 ERC2O15083 957 aa12.74□□□□□ -0.37
VPS25-203ENST00000589520 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
VPS25-203ENST00000589520 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
VPS25-203ENST00000589520 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
VPS25-203ENST00000589520 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
VPS25-203ENST00000589520 MYD88Q99836 296 aa12.74□□□□□ -0.37
VPS25-203ENST00000589520 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
VPS25-203ENST00000589520 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
VPS25-203ENST00000589520 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.378e-8■■□□□ 13.7
VPS25-203ENST00000589520 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
VPS25-203ENST00000589520 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
VPS25-203ENST00000589520 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
VPS25-203ENST00000589520 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
VPS25-203ENST00000589520 STARD3NLO95772 234 aa12.72□□□□□ -0.37
VPS25-203ENST00000589520 RABEP1Q15276 862 aa12.72□□□□□ -0.37
VPS25-203ENST00000589520 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
VPS25-203ENST00000589520 USP26Q9BXU7 913 aa12.72□□□□□ -0.37
VPS25-203ENST00000589520 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
VPS25-203ENST00000589520 MCCP23508 829 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 RXRBP28702 533 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
VPS25-203ENST00000589520 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
VPS25-203ENST00000589520 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 BICC1Q9H694 974 aaKnown RBP12.7□□□□□ -0.38
VPS25-203ENST00000589520 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 LRP5O75197 1615 aa12.7□□□□□ -0.38
VPS25-203ENST00000589520 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 KCPQ6ZWJ8 1503 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 H7C1W4 665 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
VPS25-203ENST00000589520 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
VPS25-203ENST00000589520 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
VPS25-203ENST00000589520 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
VPS25-203ENST00000589520 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
VPS25-203ENST00000589520 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
VPS25-203ENST00000589520 C5P01031 1676 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 A0A087WZG4 1122 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 HIP1O00291 1037 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 ANAPC15P60006 121 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
VPS25-203ENST00000589520 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 TICAM2Q86XR7 235 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 PIGBQ92521 554 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
VPS25-203ENST00000589520 SPATA31A1Q5TZJ5 1347 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
VPS25-203ENST00000589520 CHMLP26374 656 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 RUFY2Q8WXA3 655 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 RILPL2Q969X0 211 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
VPS25-203ENST00000589520 JCADQ9P266 1359 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 EP400Q96L91 3159 aa12.67□□□□□ -0.38
VPS25-203ENST00000589520 BCL9O00512 1426 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 ST18O60284 1047 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 A1BGP04217 495 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 CASP7P55210 303 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 TCIRG1Q13488 830 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 DDB1Q16531 1140 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 IL17RAQ96F46 866 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 KIF2CQ99661 725 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 PLCH1Q4KWH8 1693 aa12.66□□□□□ -0.38
VPS25-203ENST00000589520 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 GLI3P10071 1580 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
VPS25-203ENST00000589520 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
VPS25-203ENST00000589520 MCM2P49736 904 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
VPS25-203ENST00000589520 EVI5LQ96CN4 794 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
VPS25-203ENST00000589520 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 K7ELQ4 463 aaPredicted RBP12.64□□□□□ -0.39
VPS25-203ENST00000589520 RFX5P48382 616 aaPredicted RBP12.64□□□□□ -0.39
VPS25-203ENST00000589520 NBR1Q14596 966 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 NFKBIBQ15653 356 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 AACSQ86V21 672 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
VPS25-203ENST00000589520 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms