RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 PDIA6Q15084 440 aa17.69■□□□□ 0.42
PRKCSH-208ENST00000589126 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
PRKCSH-208ENST00000589126 ANP32CO43423 234 aa17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 EIF2S2P20042 333 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 ARHGAP27Q6ZUM4 889 aa17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
PRKCSH-208ENST00000589126 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 CNBD1Q8NA66 436 aa17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
PRKCSH-208ENST00000589126 NUP98P52948 1817 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 H0YIN7 160 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 ANXA1P04083 346 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 ZNF853P0CG23 659 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
PRKCSH-208ENST00000589126 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 PDE6BP35913 854 aa17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 MRS2Q9HD23 443 aa17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
PRKCSH-208ENST00000589126 ST5P78524 1137 aa17.64■□□□□ 0.41
PRKCSH-208ENST00000589126 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
PRKCSH-208ENST00000589126 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
PRKCSH-208ENST00000589126 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
PRKCSH-208ENST00000589126 NPHP1O15259 732 aa17.62■□□□□ 0.41
PRKCSH-208ENST00000589126 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.417e-13■□□□□ 9.5
PRKCSH-208ENST00000589126 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
PRKCSH-208ENST00000589126 UBN2Q6ZU65 1347 aa17.62■□□□□ 0.41
PRKCSH-208ENST00000589126 SRGNP10124 158 aa17.61■□□□□ 0.41
PRKCSH-208ENST00000589126 GPTP24298 496 aa17.61■□□□□ 0.41
PRKCSH-208ENST00000589126 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
PRKCSH-208ENST00000589126 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-208ENST00000589126 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
PRKCSH-208ENST00000589126 KLRG2A4D1S0 409 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 HOXB7P09629 217 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 GNAI1P63096 354 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 COPS6Q7L5N1 327 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 ZNF34Q8IZ26 560 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 XAGE3Q8WTP9 111 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 DDX21Q9NR30 783 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 SBF1O95248 1867 aa17.6■□□□□ 0.41
PRKCSH-208ENST00000589126 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 PRELPP51888 382 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 RASSF7Q02833 373 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 C9orf131Q5VYM1 1079 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 ZNF526Q8TF50 670 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-208ENST00000589126 SLX4Q8IY92 1834 aa17.58■□□□□ 0.41
PRKCSH-208ENST00000589126 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-208ENST00000589126 CCDC27Q2M243 656 aa17.58■□□□□ 0.4
PRKCSH-208ENST00000589126 SUSD4Q5VX71 490 aa17.58■□□□□ 0.4
PRKCSH-208ENST00000589126 STYK1Q6J9G0 422 aa17.58■□□□□ 0.4
PRKCSH-208ENST00000589126 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
PRKCSH-208ENST00000589126 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
PRKCSH-208ENST00000589126 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
PRKCSH-208ENST00000589126 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
PRKCSH-208ENST00000589126 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-208ENST00000589126 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-208ENST00000589126 ARFGEF2Q9Y6D5 1785 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 NFKBIEO00221 500 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 C21orf2O43822 256 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 NTSR2O95665 410 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 C8orf58Q8NAV2 365 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 NYXQ9GZU5 481 aa17.56■□□□□ 0.4
PRKCSH-208ENST00000589126 NPR1P16066 1061 aa17.55■□□□□ 0.4
PRKCSH-208ENST00000589126 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-208ENST00000589126 RNF181Q9P0P0 153 aa17.55■□□□□ 0.4
PRKCSH-208ENST00000589126 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-208ENST00000589126 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
PRKCSH-208ENST00000589126 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
PRKCSH-208ENST00000589126 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-208ENST00000589126 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
PRKCSH-208ENST00000589126 TSR2Q969E8 191 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-208ENST00000589126 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
PRKCSH-208ENST00000589126 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
PRKCSH-208ENST00000589126 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
PRKCSH-208ENST00000589126 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
PRKCSH-208ENST00000589126 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
PRKCSH-208ENST00000589126 LMNB1P20700 586 aa17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
PRKCSH-208ENST00000589126 HYPKQ9NX55 129 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms