RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 H0YIN7 160 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 NEFMP07197 916 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
APOC1-203ENST00000588802 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
APOC1-203ENST00000588802 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
APOC1-203ENST00000588802 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
APOC1-203ENST00000588802 HSPA6P17066 643 aa13.29□□□□□ -0.28
APOC1-203ENST00000588802 RIPK4P57078 832 aa13.29□□□□□ -0.28
APOC1-203ENST00000588802 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
APOC1-203ENST00000588802 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
APOC1-203ENST00000588802 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
APOC1-203ENST00000588802 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
APOC1-203ENST00000588802 CAMTA2O94983 1202 aa13.28□□□□□ -0.28
APOC1-203ENST00000588802 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
APOC1-203ENST00000588802 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
APOC1-203ENST00000588802 PRR5LQ6MZQ0 368 aa13.28□□□□□ -0.28
APOC1-203ENST00000588802 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
APOC1-203ENST00000588802 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
APOC1-203ENST00000588802 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
APOC1-203ENST00000588802 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
APOC1-203ENST00000588802 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
APOC1-203ENST00000588802 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
APOC1-203ENST00000588802 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
APOC1-203ENST00000588802 RRAGCQ9HB90 399 aa13.27□□□□□ -0.29
APOC1-203ENST00000588802 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
APOC1-203ENST00000588802 RGL2O15211 777 aa13.26□□□□□ -0.29
APOC1-203ENST00000588802 C21orf2O43822 256 aa13.26□□□□□ -0.29
APOC1-203ENST00000588802 TOMM70O94826 608 aa13.26□□□□□ -0.29
APOC1-203ENST00000588802 PRELPP51888 382 aa13.26□□□□□ -0.29
APOC1-203ENST00000588802 TAF7Q15545 349 aaPredicted RBP13.26□□□□□ -0.29
APOC1-203ENST00000588802 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
APOC1-203ENST00000588802 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 PDE6BP35913 854 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 NBPF10Q6P3W6 841 aaKnown RBP13.25□□□□□ -0.29
APOC1-203ENST00000588802 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 BRIP1Q9BX63 1249 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
APOC1-203ENST00000588802 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
APOC1-203ENST00000588802 ST5P78524 1137 aa13.24□□□□□ -0.29
APOC1-203ENST00000588802 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
APOC1-203ENST00000588802 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
APOC1-203ENST00000588802 IL16Q14005 1332 aa13.23□□□□□ -0.29
APOC1-203ENST00000588802 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
APOC1-203ENST00000588802 NFKBIEO00221 500 aa13.23□□□□□ -0.29
APOC1-203ENST00000588802 LMNB1P20700 586 aa13.23□□□□□ -0.29
APOC1-203ENST00000588802 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
APOC1-203ENST00000588802 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
APOC1-203ENST00000588802 APLP1P51693 650 aa13.22□□□□□ -0.29
APOC1-203ENST00000588802 HTRA3P83110 453 aa13.22□□□□□ -0.29
APOC1-203ENST00000588802 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
APOC1-203ENST00000588802 HLFQ16534 295 aa13.22□□□□□ -0.29
APOC1-203ENST00000588802 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
APOC1-203ENST00000588802 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOC1-203ENST00000588802 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
APOC1-203ENST00000588802 SCN7AQ01118 1682 aa13.21□□□□□ -0.29
APOC1-203ENST00000588802 PLIN1O60240 522 aa13.21□□□□□ -0.29
APOC1-203ENST00000588802 MYL6BP14649 208 aa13.21□□□□□ -0.29
APOC1-203ENST00000588802 GTF2E1P29083 439 aaPredicted RBP13.2□□□□□ -0.3
APOC1-203ENST00000588802 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
APOC1-203ENST00000588802 FSTL1Q12841 308 aa13.2□□□□□ -0.3
APOC1-203ENST00000588802 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
APOC1-203ENST00000588802 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
APOC1-203ENST00000588802 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 SRGNP10124 158 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
APOC1-203ENST00000588802 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
APOC1-203ENST00000588802 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
APOC1-203ENST00000588802 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
APOC1-203ENST00000588802 GPTP24298 496 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
APOC1-203ENST00000588802 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
APOC1-203ENST00000588802 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 TSPYL4Q9UJ04 414 aa13.18□□□□□ -0.3
APOC1-203ENST00000588802 SBF1O95248 1867 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
APOC1-203ENST00000588802 BCAR3O75815 825 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 NUTM1Q86Y26 1132 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
APOC1-203ENST00000588802 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
APOC1-203ENST00000588802 ANXA1P04083 346 aa13.16□□□□□ -0.3
APOC1-203ENST00000588802 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
APOC1-203ENST00000588802 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
APOC1-203ENST00000588802 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
APOC1-203ENST00000588802 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
APOC1-203ENST00000588802 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms