RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 PARP4Q9UKK3 1724 aaKnown RBP21.4■■□□□ 1.02
ERCC2-211ENST00000588652 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
ERCC2-211ENST00000588652 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
ERCC2-211ENST00000588652 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
ERCC2-211ENST00000588652 USP16Q9Y5T5 823 aa21.39■■□□□ 1.02
ERCC2-211ENST00000588652 GOLGA6L22H0YM25 854 aa21.39■■□□□ 1.01
ERCC2-211ENST00000588652 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
ERCC2-211ENST00000588652 LARP1Q6PKG0 1096 aaKnown RBP21.39■■□□□ 1.01
ERCC2-211ENST00000588652 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 BAG4O95429 457 aaKnown RBP21.38■■□□□ 1.01
ERCC2-211ENST00000588652 CABP4P57796 275 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 XAGE3Q8WTP9 111 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 KAZALD1Q96I82 304 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 FMNL2Q96PY5 1086 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 COPS6Q7L5N1 327 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 LRP10Q7Z4F1 713 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 SUCLG2Q96I99 432 aa21.38■■□□□ 1.01
ERCC2-211ENST00000588652 ST18O60284 1047 aa21.37■■□□□ 1.01
ERCC2-211ENST00000588652 OS9Q13438 667 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-211ENST00000588652 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-211ENST00000588652 TOM1L2Q6ZVM7 507 aa21.37■■□□□ 1.01
ERCC2-211ENST00000588652 GAS2L3Q86XJ1 694 aa21.37■■□□□ 1.01
ERCC2-211ENST00000588652 COL5A2P05997 1499 aaPredicted RBP21.37■■□□□ 1.01
ERCC2-211ENST00000588652 NUCB2P80303 420 aa21.36■■□□□ 1.01
ERCC2-211ENST00000588652 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
ERCC2-211ENST00000588652 PA2G4Q9UQ80 394 aaKnown RBP21.36■■□□□ 1.01
ERCC2-211ENST00000588652 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
ERCC2-211ENST00000588652 ABCA3Q99758 1704 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 GLI3P10071 1580 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 NEURL1BA8MQ27 555 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 BICC1Q9H694 974 aaKnown RBP21.35■■□□□ 1.01
ERCC2-211ENST00000588652 CLASRPQ8N2M8 674 aaKnown RBP21.35■■□□□ 1.01
ERCC2-211ENST00000588652 METTL22Q9BUU2 404 aaPredicted RBP21.35■■□□□ 1.01
ERCC2-211ENST00000588652 ANO2Q9NQ90 1003 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 PCDH11XQ9BZA7 1347 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 PCDH11YQ9BZA8 1340 aa21.35■■□□□ 1.01
ERCC2-211ENST00000588652 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-211ENST00000588652 ANKRD13DQ6ZTN6 518 aa21.34■■□□□ 1.01
ERCC2-211ENST00000588652 ZCRB1Q8TBF4 217 aaKnown RBP21.34■■□□□ 1.01
ERCC2-211ENST00000588652 TTC41PQ6P2S7 1318 aa21.34■■□□□ 1.01
ERCC2-211ENST00000588652 ERC1Q8IUD2 1116 aa21.34■■□□□ 1.01
ERCC2-211ENST00000588652 CWC22Q9HCG8 908 aaKnown RBP21.34■■□□□ 1.01
ERCC2-211ENST00000588652 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
ERCC2-211ENST00000588652 LAMB4A4D0S4 1761 aa21.33■■□□□ 1.01
ERCC2-211ENST00000588652 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
ERCC2-211ENST00000588652 GCKRQ14397 625 aa21.33■■□□□ 1.01
ERCC2-211ENST00000588652 MYD88Q99836 296 aa21.33■■□□□ 1.01
ERCC2-211ENST00000588652 IL25Q9H293 177 aa21.33■■□□□ 1.01
ERCC2-211ENST00000588652 MCCP23508 829 aa21.32■■□□□ 1
ERCC2-211ENST00000588652 PKP1Q13835 747 aa21.32■■□□□ 1
ERCC2-211ENST00000588652 KLHL40Q2TBA0 621 aa21.32■■□□□ 1
ERCC2-211ENST00000588652 CNTROBQ8N137 903 aa21.31■■□□□ 1
ERCC2-211ENST00000588652 ZGPATQ8N5A5 531 aaKnown RBP21.31■■□□□ 1
ERCC2-211ENST00000588652 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
ERCC2-211ENST00000588652 ANAPC15P60006 121 aa21.31■■□□□ 1
ERCC2-211ENST00000588652 PALD1Q9ULE6 856 aa21.31■■□□□ 1
ERCC2-211ENST00000588652 EPB41L2O43491 1005 aaKnown RBP21.3■■□□□ 1
ERCC2-211ENST00000588652 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
ERCC2-211ENST00000588652 CARD10Q9BWT7 1032 aa21.3■■□□□ 1
ERCC2-211ENST00000588652 MCTP1Q6DN14 999 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 DDX49Q9Y6V7 483 aaKnown RBP21.29■■□□□ 1
ERCC2-211ENST00000588652 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
ERCC2-211ENST00000588652 SASH1O94885 1247 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 IL2RBP14784 551 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 NEK4P51957 841 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 IL17RAQ96F46 866 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 ECHDC1Q9NTX5 307 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 UBR2Q8IWV8 1755 aa21.29■■□□□ 1
ERCC2-211ENST00000588652 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
ERCC2-211ENST00000588652 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
ERCC2-211ENST00000588652 NHSL1Q5SYE7 1610 aa21.28■■□□□ 1
ERCC2-211ENST00000588652 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
ERCC2-211ENST00000588652 SGSM2O43147 1006 aa21.28■■□□□ 1
ERCC2-211ENST00000588652 IFIT2P09913 472 aaKnown RBP21.28■■□□□ 1
ERCC2-211ENST00000588652 G3BP1Q13283 466 aaKnown RBP eCLIP21.28■■□□□ 1
ERCC2-211ENST00000588652 EPHA10Q5JZY3 1008 aa21.27■■□□□ 1
ERCC2-211ENST00000588652 AACSQ86V21 672 aa21.27■■□□□ 1
ERCC2-211ENST00000588652 GPATCH3Q96I76 525 aa21.27■■□□□ 1
ERCC2-211ENST00000588652 ZDHHC9Q9Y397 364 aa21.27■■□□□ 1
ERCC2-211ENST00000588652 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.27■■□□□ 1
ERCC2-211ENST00000588652 STRN4Q9NRL3 753 aa21.26■□□□□ 0.99
ERCC2-211ENST00000588652 LMBRD1Q9NUN5 540 aa21.26■□□□□ 0.99
ERCC2-211ENST00000588652 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
ERCC2-211ENST00000588652 HSPA4P34932 840 aa21.25■□□□□ 0.99
ERCC2-211ENST00000588652 PLBD2Q8NHP8 589 aa21.25■□□□□ 0.99
ERCC2-211ENST00000588652 EAF2Q96CJ1 260 aaPredicted RBP21.25■□□□□ 0.99
ERCC2-211ENST00000588652 SIL1Q9H173 461 aa21.25■□□□□ 0.99
ERCC2-211ENST00000588652 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
ERCC2-211ENST00000588652 RAD50Q92878 1312 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 MCM2P49736 904 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
ERCC2-211ENST00000588652 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 KLHDC4Q8TBB5 520 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
ERCC2-211ENST00000588652 TMX3Q96JJ7 454 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 EVA1CP58658 441 aa21.24■□□□□ 0.99
ERCC2-211ENST00000588652 COL15A1P39059 1388 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms