RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 KIF5BP33176 963 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 CCDC112Q8NEF3 446 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 SCAND2PQ9GZW5 306 aaPredicted RBP18.52■□□□□ 0.56
PTPRS-205ENST00000588012 DISP3Q9P2K9 1392 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 PI4KAP2A4QPH2 592 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 PI4KAP1Q8N8J0 262 aa18.52■□□□□ 0.56
PTPRS-205ENST00000588012 MAP7D2Q96T17 732 aa18.52■□□□□ 0.55
PTPRS-205ENST00000588012 KAT14Q9H8E8 782 aa18.52■□□□□ 0.55
PTPRS-205ENST00000588012 FAM83GA6ND36 823 aa18.52■□□□□ 0.55
PTPRS-205ENST00000588012 ATP6V1AP38606 617 aa18.52■□□□□ 0.55
PTPRS-205ENST00000588012 C11orf95C9JLR9 678 aaPredicted RBP18.51■□□□□ 0.55
PTPRS-205ENST00000588012 GUCY1B3Q02153 619 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 IL16Q14005 1332 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 PPIP5K1Q6PFW1 1433 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 RPRD2Q5VT52 1461 aaKnown RBP18.51■□□□□ 0.55
PTPRS-205ENST00000588012 FGFR1OPO95684 399 aaKnown RBP18.51■□□□□ 0.55
PTPRS-205ENST00000588012 KIF20AO95235 890 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 ANKRD13DQ6ZTN6 518 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 LIMCH1Q9UPQ0 1083 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
PTPRS-205ENST00000588012 TSPY2A6NKD2 308 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 CETN2P41208 172 aa18.51■□□□□ 0.55
PTPRS-205ENST00000588012 FILIP1Q7Z7B0 1213 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 TMEM67Q5HYA8 995 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 MPNDQ8N594 471 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
PTPRS-205ENST00000588012 MCM4P33991 863 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 MFSD6Q6ZSS7 791 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
PTPRS-205ENST00000588012 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 ANO10Q9NW15 660 aa18.5■□□□□ 0.55
PTPRS-205ENST00000588012 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
PTPRS-205ENST00000588012 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 ENOX2Q16206 610 aaKnown RBP18.49■□□□□ 0.55
PTPRS-205ENST00000588012 ARHGAP29Q52LW3 1261 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 PLCH2O75038 1416 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
PTPRS-205ENST00000588012 SPA17Q15506 151 aa18.49■□□□□ 0.55
PTPRS-205ENST00000588012 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
PTPRS-205ENST00000588012 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
PTPRS-205ENST00000588012 LEKR1Q6ZMV7 388 aa18.48■□□□□ 0.55
PTPRS-205ENST00000588012 GBP2P32456 591 aaPredicted RBP18.48■□□□□ 0.55
PTPRS-205ENST00000588012 A2MP01023 1474 aa18.48■□□□□ 0.55
PTPRS-205ENST00000588012 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
PTPRS-205ENST00000588012 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
PTPRS-205ENST00000588012 CCDC148Q8NFR7 591 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 TSPYL1Q9H0U9 437 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 RALGAPBQ86X10 1494 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 VPS36Q86VN1 386 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 NCOA7Q8NI08 942 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 CALML4Q96GE6 196 aa18.47■□□□□ 0.55
PTPRS-205ENST00000588012 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
PTPRS-205ENST00000588012 VAT1LQ9HCJ6 419 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 SYCE3A1L190 88 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
PTPRS-205ENST00000588012 IARSP41252 1262 aaKnown RBP18.46■□□□□ 0.55
PTPRS-205ENST00000588012 ZGPATQ8N5A5 531 aaKnown RBP18.46■□□□□ 0.55
PTPRS-205ENST00000588012 CENPHQ9H3R5 247 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 EIF3JO75822 258 aaKnown RBP18.46■□□□□ 0.55
PTPRS-205ENST00000588012 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 CCDC183Q5T5S1 534 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 DDB1Q16531 1140 aa18.46■□□□□ 0.55
PTPRS-205ENST00000588012 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 CCDC144CPQ8IYA2 1237 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 CNNM3Q8NE01 707 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 HMG20BQ9P0W2 317 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 LIG1P18858 919 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 TAX1BP1Q86VP1 789 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 AMPD3Q01432 767 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
PTPRS-205ENST00000588012 METAP2P50579 478 aaKnown RBP eCLIP18.44■□□□□ 0.543e-6■■■□□ 15.2
PTPRS-205ENST00000588012 XAGE3Q8WTP9 111 aa18.44■□□□□ 0.54
PTPRS-205ENST00000588012 CTAGE5O15320 804 aa18.44■□□□□ 0.54
PTPRS-205ENST00000588012 ANXA1P04083 346 aa18.44■□□□□ 0.54
PTPRS-205ENST00000588012 HAND2P61296 217 aa18.44■□□□□ 0.54
PTPRS-205ENST00000588012 BIVM-ERCC5R4GMW8 1640 aa18.44■□□□□ 0.54
PTPRS-205ENST00000588012 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
PTPRS-205ENST00000588012 NLRP3Q96P20 1036 aa18.43■□□□□ 0.54
PTPRS-205ENST00000588012 CCDC178Q5BJE1 867 aa18.43■□□□□ 0.54
PTPRS-205ENST00000588012 NYXQ9GZU5 481 aa18.43■□□□□ 0.54
PTPRS-205ENST00000588012 TMEM87AQ8NBN3 555 aa18.42■□□□□ 0.54
PTPRS-205ENST00000588012 FAM193AP78312 1265 aa18.42■□□□□ 0.54
PTPRS-205ENST00000588012 STXBP4Q6ZWJ1 553 aa18.42■□□□□ 0.54
PTPRS-205ENST00000588012 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
PTPRS-205ENST00000588012 IL2RBP14784 551 aa18.42■□□□□ 0.54
PTPRS-205ENST00000588012 GJB2P29033 226 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms