RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
ERCC1-205ENST00000587888 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
ERCC1-205ENST00000587888 TNRC6CQ9HCJ0 1690 aaKnown RBP18.84■□□□□ 0.61
ERCC1-205ENST00000587888 WDR90Q96KV7 1748 aa18.83■□□□□ 0.61
ERCC1-205ENST00000587888 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
ERCC1-205ENST00000587888 SRGNP10124 158 aa18.83■□□□□ 0.6
ERCC1-205ENST00000587888 STYK1Q6J9G0 422 aa18.83■□□□□ 0.6
ERCC1-205ENST00000587888 CLEC4GQ6UXB4 293 aa18.83■□□□□ 0.6
ERCC1-205ENST00000587888 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 PRPF40BQ6NWY9 871 aaKnown RBP18.82■□□□□ 0.6
ERCC1-205ENST00000587888 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
ERCC1-205ENST00000587888 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 KLRG1Q96E93 195 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 MASTLQ96GX5 879 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
ERCC1-205ENST00000587888 POTECB2RU33 542 aa18.81■□□□□ 0.6
ERCC1-205ENST00000587888 NEFMP07197 916 aa18.81■□□□□ 0.6
ERCC1-205ENST00000587888 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
ERCC1-205ENST00000587888 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
ERCC1-205ENST00000587888 TAOK3Q9H2K8 898 aa18.8■□□□□ 0.6
ERCC1-205ENST00000587888 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
ERCC1-205ENST00000587888 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
ERCC1-205ENST00000587888 TIAM2Q8IVF5 1701 aa18.79■□□□□ 0.6
ERCC1-205ENST00000587888 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
ERCC1-205ENST00000587888 HLFQ16534 295 aa18.78■□□□□ 0.6
ERCC1-205ENST00000587888 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
ERCC1-205ENST00000587888 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-205ENST00000587888 NPR1P16066 1061 aa18.77■□□□□ 0.6
ERCC1-205ENST00000587888 GTF2E1P29083 439 aaPredicted RBP18.77■□□□□ 0.6
ERCC1-205ENST00000587888 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
ERCC1-205ENST00000587888 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
ERCC1-205ENST00000587888 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
ERCC1-205ENST00000587888 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
ERCC1-205ENST00000587888 JMYQ8N9B5 988 aa18.76■□□□□ 0.59
ERCC1-205ENST00000587888 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
ERCC1-205ENST00000587888 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
ERCC1-205ENST00000587888 RRP7AQ9Y3A4 280 aaKnown RBP18.75■□□□□ 0.59
ERCC1-205ENST00000587888 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
ERCC1-205ENST00000587888 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
ERCC1-205ENST00000587888 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
ERCC1-205ENST00000587888 DICER1Q9UPY3 1922 aaKnown RBP18.73■□□□□ 0.59
ERCC1-205ENST00000587888 KLRG2A4D1S0 409 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-205ENST00000587888 MYL6BP14649 208 aa18.73■□□□□ 0.59
ERCC1-205ENST00000587888 NFE2L2Q16236 605 aa18.73■□□□□ 0.59
ERCC1-205ENST00000587888 CCDC93Q567U6 631 aa18.73■□□□□ 0.59
ERCC1-205ENST00000587888 RGL2O15211 777 aa18.72■□□□□ 0.59
ERCC1-205ENST00000587888 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
ERCC1-205ENST00000587888 ZNF277Q9NRM2 450 aaPredicted RBP18.72■□□□□ 0.59
ERCC1-205ENST00000587888 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
ERCC1-205ENST00000587888 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
ERCC1-205ENST00000587888 ALDH1B1P30837 517 aa18.71■□□□□ 0.59
ERCC1-205ENST00000587888 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
ERCC1-205ENST00000587888 NUTM1Q86Y26 1132 aa18.71■□□□□ 0.59
ERCC1-205ENST00000587888 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
ERCC1-205ENST00000587888 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
ERCC1-205ENST00000587888 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
ERCC1-205ENST00000587888 COL13A1Q5TAT6 717 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-205ENST00000587888 KIF6Q6ZMV9 814 aa18.7■□□□□ 0.58
ERCC1-205ENST00000587888 TTLL7Q6ZT98 887 aa18.7■□□□□ 0.58
ERCC1-205ENST00000587888 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
ERCC1-205ENST00000587888 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 GPTP24298 496 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 RTKN2Q8IZC4 609 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 ZBTB3Q9H5J0 574 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 MAP3K15Q6ZN16 1313 aa18.69■□□□□ 0.58
ERCC1-205ENST00000587888 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
ERCC1-205ENST00000587888 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
ERCC1-205ENST00000587888 IQCA1LA6NCM1 817 aa18.67■□□□□ 0.58
ERCC1-205ENST00000587888 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
ERCC1-205ENST00000587888 ZNF541Q9H0D2 1346 aa18.66■□□□□ 0.58
ERCC1-205ENST00000587888 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
ERCC1-205ENST00000587888 EIF2S2P20042 333 aaKnown RBP18.65■□□□□ 0.58
ERCC1-205ENST00000587888 IARSP41252 1262 aaKnown RBP18.65■□□□□ 0.58
ERCC1-205ENST00000587888 RIPK4P57078 832 aa18.65■□□□□ 0.58
ERCC1-205ENST00000587888 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-205ENST00000587888 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
ERCC1-205ENST00000587888 TAF1DQ9H5J8 278 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-205ENST00000587888 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
ERCC1-205ENST00000587888 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
ERCC1-205ENST00000587888 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
ERCC1-205ENST00000587888 L3MBTL3Q96JM7 780 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-205ENST00000587888 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.57
ERCC1-205ENST00000587888 CLEC11AQ9Y240 323 aa18.64■□□□□ 0.57
ERCC1-205ENST00000587888 NUP98P52948 1817 aa18.64■□□□□ 0.57
ERCC1-205ENST00000587888 ABCC12Q96J65 1359 aa18.64■□□□□ 0.57
ERCC1-205ENST00000587888 HSPA1AP0DMV8 641 aaKnown RBP18.63■□□□□ 0.57
ERCC1-205ENST00000587888 HSPA1BP0DMV9 641 aaKnown RBP18.63■□□□□ 0.57
ERCC1-205ENST00000587888 CRY2Q49AN0 593 aa18.63■□□□□ 0.57
ERCC1-205ENST00000587888 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
ERCC1-205ENST00000587888 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
ERCC1-205ENST00000587888 HACL1Q9UJ83 578 aa18.63■□□□□ 0.57
ERCC1-205ENST00000587888 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
ERCC1-205ENST00000587888 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
ERCC1-205ENST00000587888 LDHDQ86WU2 507 aa18.62■□□□□ 0.57
ERCC1-205ENST00000587888 RBM17Q96I25 401 aaKnown RBP18.62■□□□□ 0.57
ERCC1-205ENST00000587888 FZD9O00144 591 aa18.61■□□□□ 0.57
ERCC1-205ENST00000587888 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
ERCC1-205ENST00000587888 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms