RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 GNAT3A8MTJ3 354 aa32.1■■■□□ 2.73
CAPNS1-204ENST00000587718 CCDC87Q9NVE4 849 aa32.1■■■□□ 2.73
CAPNS1-204ENST00000587718 SRP68Q9UHB9 627 aaKnown RBP32.1■■■□□ 2.73
CAPNS1-204ENST00000587718 USP42Q9H9J4 1324 aaKnown RBP32.09■■■□□ 2.73
CAPNS1-204ENST00000587718 VSIG10Q8N0Z9 540 aa32.09■■■□□ 2.73
CAPNS1-204ENST00000587718 NOB1Q9ULX3 412 aaKnown RBP32.09■■■□□ 2.73
CAPNS1-204ENST00000587718 VAMP4O75379 141 aa32.08■■■□□ 2.73
CAPNS1-204ENST00000587718 TNNQ9UQP3 1299 aa32.08■■■□□ 2.73
CAPNS1-204ENST00000587718 C10orf71Q711Q0 1435 aa32.07■■■□□ 2.72
CAPNS1-204ENST00000587718 KIF13BQ9NQT8 1826 aa32.06■■■□□ 2.72
CAPNS1-204ENST00000587718 TGFB2P61812 414 aa32.06■■■□□ 2.72
CAPNS1-204ENST00000587718 SOS1Q07889 1333 aaPredicted RBP32.05■■■□□ 2.72
CAPNS1-204ENST00000587718 PXDNLA1KZ92 1463 aa32.05■■■□□ 2.72
CAPNS1-204ENST00000587718 WWC3Q9ULE0 1092 aa32.04■■■□□ 2.72
CAPNS1-204ENST00000587718 PARP3Q9Y6F1 533 aa32.04■■■□□ 2.72
CAPNS1-204ENST00000587718 CEMIPQ8WUJ3 1361 aa32.04■■■□□ 2.72
CAPNS1-204ENST00000587718 RGS3P49796 1198 aa32.03■■■□□ 2.72
CAPNS1-204ENST00000587718 SKAP1Q86WV1 359 aa32.03■■■□□ 2.72
CAPNS1-204ENST00000587718 MRPL50Q8N5N7 158 aaKnown RBP32.03■■■□□ 2.72
CAPNS1-204ENST00000587718 MBIPQ9NS73 344 aa32.03■■■□□ 2.72
CAPNS1-204ENST00000587718 TEFQ10587 303 aa32.02■■■□□ 2.72
CAPNS1-204ENST00000587718 KIAA1551Q9HCM1 1747 aa32.02■■■□□ 2.72
CAPNS1-204ENST00000587718 UBR2Q8IWV8 1755 aa32.02■■■□□ 2.72
CAPNS1-204ENST00000587718 ZBTB1Q9Y2K1 713 aa32.02■■■□□ 2.72
CAPNS1-204ENST00000587718 ZNF790Q6PG37 636 aa32.01■■■□□ 2.71
CAPNS1-204ENST00000587718 ZBTB40Q9NUA8 1239 aa32.01■■■□□ 2.71
CAPNS1-204ENST00000587718 TM4SF1P30408 202 aa32■■■□□ 2.71
CAPNS1-204ENST00000587718 DDR1Q08345 913 aa32■■■□□ 2.71
CAPNS1-204ENST00000587718 TTC5Q8N0Z6 440 aa32■■■□□ 2.71
CAPNS1-204ENST00000587718 ZNF496Q96IT1 587 aaPredicted RBP32■■■□□ 2.71
CAPNS1-204ENST00000587718 A0A0G2JLW4 131 aa31.99■■■□□ 2.71
CAPNS1-204ENST00000587718 ITPRIPQ8IWB1 547 aa31.99■■■□□ 2.71
CAPNS1-204ENST00000587718 USPL1Q5W0Q7 1092 aa31.98■■■□□ 2.71
CAPNS1-204ENST00000587718 TMEM57Q8N5G2 664 aa31.98■■■□□ 2.71
CAPNS1-204ENST00000587718 LAS1LQ9Y4W2 734 aaKnown RBP31.98■■■□□ 2.71
CAPNS1-204ENST00000587718 SIPA1L3O60292 1781 aaPredicted RBP31.97■■■□□ 2.71
CAPNS1-204ENST00000587718 TWISTNBQ3B726 338 aaPredicted RBP31.97■■■□□ 2.71
CAPNS1-204ENST00000587718 API5Q9BZZ5 524 aaKnown RBP31.97■■■□□ 2.71
CAPNS1-204ENST00000587718 NARFQ9UHQ1 456 aa31.97■■■□□ 2.71
CAPNS1-204ENST00000587718 PDZRN3Q9UPQ7 1066 aa31.97■■■□□ 2.71
CAPNS1-204ENST00000587718 HTATSF1O43719 755 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 ZPR1O75312 459 aa31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 DPEP1P16444 411 aa31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 NPM2Q86SE8 214 aaKnown RBP31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 COL15A1P39059 1388 aa31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 HEG1Q9ULI3 1381 aa31.96■■■□□ 2.71
CAPNS1-204ENST00000587718 CHL1O00533 1208 aa31.95■■■□□ 2.71
CAPNS1-204ENST00000587718 SMC5Q8IY18 1101 aa31.95■■■□□ 2.71
CAPNS1-204ENST00000587718 ABCC4O15439 1325 aa31.95■■■□□ 2.7
CAPNS1-204ENST00000587718 POLRMTO00411 1230 aaKnown RBP31.94■■■□□ 2.7
CAPNS1-204ENST00000587718 KCNA3P22001 575 aa31.94■■■□□ 2.7
CAPNS1-204ENST00000587718 STARD3NLO95772 234 aa31.94■■■□□ 2.7
CAPNS1-204ENST00000587718 THUMPD2Q9BTF0 503 aaKnown RBP31.94■■■□□ 2.7
CAPNS1-204ENST00000587718 BCL2L12Q9HB09 334 aa31.94■■■□□ 2.7
CAPNS1-204ENST00000587718 ADCY9O60503 1353 aa31.93■■■□□ 2.7
CAPNS1-204ENST00000587718 N4BP2Q86UW6 1770 aaPredicted RBP31.93■■■□□ 2.7
CAPNS1-204ENST00000587718 EIF5P55010 431 aaKnown RBP31.92■■■□□ 2.7
CAPNS1-204ENST00000587718 TEX13AQ9BXU3 409 aaPredicted RBP31.92■■■□□ 2.7
CAPNS1-204ENST00000587718 KCNQ3O43525 872 aa31.91■■■□□ 2.7
CAPNS1-204ENST00000587718 ATP10DQ9P241 1426 aa31.91■■■□□ 2.7
CAPNS1-204ENST00000587718 C1QTNF8P60827 252 aa31.9■■■□□ 2.7
CAPNS1-204ENST00000587718 BTBD11A6QL63 1104 aa31.9■■■□□ 2.7
CAPNS1-204ENST00000587718 NFIXQ14938 502 aa31.9■■■□□ 2.7
CAPNS1-204ENST00000587718 FMNL2Q96PY5 1086 aa31.9■■■□□ 2.7
CAPNS1-204ENST00000587718 BCS1LQ9Y276 419 aa31.9■■■□□ 2.7
CAPNS1-204ENST00000587718 TSPYL6Q8N831 410 aa31.88■■■□□ 2.69
CAPNS1-204ENST00000587718 MCM10Q7L590 875 aa31.87■■■□□ 2.69
CAPNS1-204ENST00000587718 GIGYF1O75420 1035 aaPredicted RBP31.86■■■□□ 2.69
CAPNS1-204ENST00000587718 C8orf58Q8NAV2 365 aa31.86■■■□□ 2.69
CAPNS1-204ENST00000587718 ZBTB7BO15156 539 aaPredicted RBP31.85■■■□□ 2.69
CAPNS1-204ENST00000587718 RTF1Q92541 710 aaKnown RBP31.85■■■□□ 2.69
CAPNS1-204ENST00000587718 BABAM1Q9NWV8 329 aa31.85■■■□□ 2.69
CAPNS1-204ENST00000587718 BRCA1P38398 1863 aaKnown RBP31.85■■■□□ 2.69
CAPNS1-204ENST00000587718 DCTN1Q14203 1278 aa31.84■■■□□ 2.69
CAPNS1-204ENST00000587718 A0A087WZG4 1122 aa31.83■■■□□ 2.69
CAPNS1-204ENST00000587718 PIM2Q9P1W9 311 aa31.83■■■□□ 2.69
CAPNS1-204ENST00000587718 IL6STP40189 918 aaPredicted RBP31.82■■■□□ 2.68
CAPNS1-204ENST00000587718 A1BGP04217 495 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 GCC1Q96CN9 775 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 PTPRCP08575 1304 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 SERPINB2P05120 415 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 CHRNA5P30532 468 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 USP16Q9Y5T5 823 aa31.81■■■□□ 2.68
CAPNS1-204ENST00000587718 NRXN2Q9P2S2 1712 aa31.8■■■□□ 2.68
CAPNS1-204ENST00000587718 ARHGAP27Q6ZUM4 889 aa31.78■■■□□ 2.68
CAPNS1-204ENST00000587718 GPBP1L1Q9HC44 474 aaPredicted RBP31.78■■■□□ 2.68
CAPNS1-204ENST00000587718 PRAMEF22A3QJZ6 481 aa31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 DALRD3Q5D0E6 543 aaKnown RBP31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 INTS3Q68E01 1043 aaKnown RBP31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 TBC1D2BQ9UPU7 963 aa31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 NUCB1Q02818 461 aa31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 UPF2Q9HAU5 1272 aaKnown RBP31.77■■■□□ 2.68
CAPNS1-204ENST00000587718 AFDNP55196 1824 aaKnown RBP31.76■■■□□ 2.68
CAPNS1-204ENST00000587718 TAF7Q15545 349 aaPredicted RBP31.76■■■□□ 2.67
CAPNS1-204ENST00000587718 SNRPA1P09661 255 aaKnown RBP31.75■■■□□ 2.67
CAPNS1-204ENST00000587718 TBC1D9BQ66K14 1250 aa31.75■■■□□ 2.67
CAPNS1-204ENST00000587718 BICDL1Q6ZP65 573 aa31.73■■■□□ 2.67
CAPNS1-204ENST00000587718 DAXXQ9UER7 740 aaPredicted RBP31.73■■■□□ 2.67
CAPNS1-204ENST00000587718 ZNF330Q9Y3S2 320 aaPredicted RBP31.73■■■□□ 2.67
CAPNS1-204ENST00000587718 ARFGEF1Q9Y6D6 1849 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms