RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 WBP1LQ9NX94 342 aa24.42■■□□□ 1.5
CXXC1-210ENST00000587396 VIRMAQ69YN4 1812 aaKnown RBP24.41■■□□□ 1.5
CXXC1-210ENST00000587396 IL6STP40189 918 aaPredicted RBP24.41■■□□□ 1.5
CXXC1-210ENST00000587396 AMER1Q5JTC6 1135 aaPredicted RBP24.41■■□□□ 1.5
CXXC1-210ENST00000587396 IL17REQ8NFR9 667 aa24.41■■□□□ 1.5
CXXC1-210ENST00000587396 L3MBTL3Q96JM7 780 aaPredicted RBP24.41■■□□□ 1.5
CXXC1-210ENST00000587396 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
CXXC1-210ENST00000587396 TIMELESSQ9UNS1 1208 aa24.41■■□□□ 1.5
CXXC1-210ENST00000587396 UBR2Q8IWV8 1755 aa24.41■■□□□ 1.5
CXXC1-210ENST00000587396 TEFQ10587 303 aa24.4■■□□□ 1.5
CXXC1-210ENST00000587396 C7orf43Q8WVR3 580 aa24.4■■□□□ 1.5
CXXC1-210ENST00000587396 SCN7AQ01118 1682 aa24.4■■□□□ 1.5
CXXC1-210ENST00000587396 KCNQ3O43525 872 aa24.39■■□□□ 1.49
CXXC1-210ENST00000587396 SOGA3Q5TF21 947 aa24.39■■□□□ 1.49
CXXC1-210ENST00000587396 DIAPH1O60610 1272 aaKnown RBP24.38■■□□□ 1.49
CXXC1-210ENST00000587396 MAP1SQ66K74 1059 aaPredicted RBP24.38■■□□□ 1.49
CXXC1-210ENST00000587396 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
CXXC1-210ENST00000587396 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
CXXC1-210ENST00000587396 TEX13AQ9BXU3 409 aaPredicted RBP24.38■■□□□ 1.49
CXXC1-210ENST00000587396 CACNA1SQ13698 1873 aa24.38■■□□□ 1.49
CXXC1-210ENST00000587396 EPHX2P34913 555 aa24.37■■□□□ 1.49
CXXC1-210ENST00000587396 CCDC93Q567U6 631 aa24.37■■□□□ 1.49
CXXC1-210ENST00000587396 HACL1Q9UJ83 578 aa24.37■■□□□ 1.49
CXXC1-210ENST00000587396 HSPA8P11142 646 aaKnown RBP24.36■■□□□ 1.49
CXXC1-210ENST00000587396 FAM161AQ3B820 660 aa24.36■■□□□ 1.49
CXXC1-210ENST00000587396 NBPF5PQ86XG9 351 aaPredicted RBP24.36■■□□□ 1.49
CXXC1-210ENST00000587396 ABHD8Q96I13 439 aa24.36■■□□□ 1.49
CXXC1-210ENST00000587396 RNF123Q5XPI4 1314 aa24.35■■□□□ 1.49
CXXC1-210ENST00000587396 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
CXXC1-210ENST00000587396 CNTROBQ8N137 903 aa24.35■■□□□ 1.49
CXXC1-210ENST00000587396 FMNL2Q96PY5 1086 aa24.35■■□□□ 1.49
CXXC1-210ENST00000587396 GNAT3A8MTJ3 354 aa24.34■■□□□ 1.49
CXXC1-210ENST00000587396 FKBP4Q02790 459 aaKnown RBP eCLIP24.34■■□□□ 1.49
CXXC1-210ENST00000587396 USP16Q9Y5T5 823 aa24.34■■□□□ 1.49
CXXC1-210ENST00000587396 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
CXXC1-210ENST00000587396 FAM177BA6PVY3 158 aa24.33■■□□□ 1.49
CXXC1-210ENST00000587396 U2SURPO15042 1029 aaKnown RBP24.33■■□□□ 1.49
CXXC1-210ENST00000587396 SLC34A2O95436 690 aa24.33■■□□□ 1.49
CXXC1-210ENST00000587396 NPR1P16066 1061 aa24.33■■□□□ 1.49
CXXC1-210ENST00000587396 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
CXXC1-210ENST00000587396 RASSF10A6NK89 507 aa24.32■■□□□ 1.48
CXXC1-210ENST00000587396 CC2D1BQ5T0F9 858 aaKnown RBP24.32■■□□□ 1.48
CXXC1-210ENST00000587396 ABT1Q9ULW3 272 aaKnown RBP24.32■■□□□ 1.48
CXXC1-210ENST00000587396 WDR33Q9C0J8 1336 aaKnown RBP24.32■■□□□ 1.48
CXXC1-210ENST00000587396 SCN4AP35499 1836 aa24.31■■□□□ 1.48
CXXC1-210ENST00000587396 FMR1Q06787 632 aaKnown RBP eCLIP24.31■■□□□ 1.48
CXXC1-210ENST00000587396 SYNE4Q8N205 404 aa24.3■■□□□ 1.48
CXXC1-210ENST00000587396 BTBD11A6QL63 1104 aa24.29■■□□□ 1.48
CXXC1-210ENST00000587396 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
CXXC1-210ENST00000587396 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
CXXC1-210ENST00000587396 IARSP41252 1262 aaKnown RBP24.28■■□□□ 1.48
CXXC1-210ENST00000587396 GRM1Q13255 1194 aa24.28■■□□□ 1.48
CXXC1-210ENST00000587396 PNMA8AQ86V59 439 aaPredicted RBP24.28■■□□□ 1.48
CXXC1-210ENST00000587396 GAS2L2Q8NHY3 880 aa24.28■■□□□ 1.48
CXXC1-210ENST00000587396 ARFGEF2Q9Y6D5 1785 aa24.27■■□□□ 1.48
CXXC1-210ENST00000587396 FZD9O00144 591 aa24.27■■□□□ 1.48
CXXC1-210ENST00000587396 MAP2K1Q02750 393 aaPredicted RBP24.27■■□□□ 1.48
CXXC1-210ENST00000587396 PAXIP1Q6ZW49 1069 aaPredicted RBP24.27■■□□□ 1.48
CXXC1-210ENST00000587396 RTKN2Q8IZC4 609 aa24.27■■□□□ 1.48
CXXC1-210ENST00000587396 NIP7Q9Y221 180 aaKnown RBP eCLIP24.27■■□□□ 1.48
CXXC1-210ENST00000587396 KLRG2A4D1S0 409 aaPredicted RBP24.26■■□□□ 1.47
CXXC1-210ENST00000587396 GJA3Q9Y6H8 435 aa24.26■■□□□ 1.47
CXXC1-210ENST00000587396 ADAMTSL1Q8N6G6 1762 aa24.26■■□□□ 1.47
CXXC1-210ENST00000587396 CCDC85CA6NKD9 419 aa24.25■■□□□ 1.47
CXXC1-210ENST00000587396 CLEC4GQ6UXB4 293 aa24.25■■□□□ 1.47
CXXC1-210ENST00000587396 TPTE2Q6XPS3 522 aa24.25■■□□□ 1.47
CXXC1-210ENST00000587396 DDX21Q9NR30 783 aaKnown RBP eCLIP24.25■■□□□ 1.47
CXXC1-210ENST00000587396 BCORQ6W2J9 1755 aa24.24■■□□□ 1.47
CXXC1-210ENST00000587396 PHACTR3Q96KR7 559 aa24.24■■□□□ 1.47
CXXC1-210ENST00000587396 ZNF652Q9Y2D9 606 aa24.24■■□□□ 1.47
CXXC1-210ENST00000587396 GPC2Q8N158 579 aa24.23■■□□□ 1.47
CXXC1-210ENST00000587396 TSKSQ9UJT2 592 aa24.23■■□□□ 1.47
CXXC1-210ENST00000587396 CEMIPQ8WUJ3 1361 aa24.23■■□□□ 1.47
CXXC1-210ENST00000587396 SIPA1L3O60292 1781 aaPredicted RBP24.23■■□□□ 1.47
CXXC1-210ENST00000587396 HLFQ16534 295 aa24.22■■□□□ 1.47
CXXC1-210ENST00000587396 CYP4F22Q6NT55 531 aa24.22■■□□□ 1.47
CXXC1-210ENST00000587396 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
CXXC1-210ENST00000587396 CAPNS2Q96L46 248 aa24.22■■□□□ 1.47
CXXC1-210ENST00000587396 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
CXXC1-210ENST00000587396 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
CXXC1-210ENST00000587396 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
CXXC1-210ENST00000587396 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
CXXC1-210ENST00000587396 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
CXXC1-210ENST00000587396 JDP2Q8WYK2 163 aa24.21■■□□□ 1.47
CXXC1-210ENST00000587396 COL3A1P02461 1466 aaPredicted RBP24.2■■□□□ 1.47
CXXC1-210ENST00000587396 TRAF5O00463 557 aa24.2■■□□□ 1.46
CXXC1-210ENST00000587396 GTF2E1P29083 439 aaPredicted RBP24.2■■□□□ 1.46
CXXC1-210ENST00000587396 ALDH1B1P30837 517 aa24.2■■□□□ 1.46
CXXC1-210ENST00000587396 EPS15P42566 896 aa24.2■■□□□ 1.46
CXXC1-210ENST00000587396 COL4A5P29400 1685 aa24.19■■□□□ 1.46
CXXC1-210ENST00000587396 SNRPA1P09661 255 aaKnown RBP24.19■■□□□ 1.46
CXXC1-210ENST00000587396 GPR101Q96P66 508 aaPredicted RBP24.19■■□□□ 1.46
CXXC1-210ENST00000587396 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
CXXC1-210ENST00000587396 EIF6P56537 245 aaKnown RBP24.18■■□□□ 1.46
CXXC1-210ENST00000587396 MLLT1Q03111 559 aaPredicted RBP24.18■■□□□ 1.46
CXXC1-210ENST00000587396 MCM10Q7L590 875 aa24.18■■□□□ 1.46
CXXC1-210ENST00000587396 NUTM1Q86Y26 1132 aa24.18■■□□□ 1.46
CXXC1-210ENST00000587396 BEGAINQ9BUH8 593 aa24.18■■□□□ 1.46
CXXC1-210ENST00000587396 LMOD1P29536 600 aaPredicted RBP24.17■■□□□ 1.46
CXXC1-210ENST00000587396 SCNN1DP51172 638 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms