RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 HLFQ16534 295 aa29.02■■■□□ 2.24
DDX39A-205ENST00000586993 CCDC27Q2M243 656 aa29.02■■■□□ 2.24
DDX39A-205ENST00000586993 NUP98P52948 1817 aa29.01■■■□□ 2.24
DDX39A-205ENST00000586993 KCNA3P22001 575 aa29.01■■■□□ 2.23
DDX39A-205ENST00000586993 GNAI1P63096 354 aa29.01■■■□□ 2.23
DDX39A-205ENST00000586993 CALD1Q05682 793 aaKnown RBP29.01■■■□□ 2.23
DDX39A-205ENST00000586993 WWC1Q8IX03 1113 aa29.01■■■□□ 2.23
DDX39A-205ENST00000586993 CLEC4GQ6UXB4 293 aa29■■■□□ 2.23
DDX39A-205ENST00000586993 CHRNA5P30532 468 aa28.99■■■□□ 2.23
DDX39A-205ENST00000586993 SETDB2Q96T68 719 aa28.99■■■□□ 2.23
DDX39A-205ENST00000586993 RGL2O15211 777 aa28.98■■■□□ 2.23
DDX39A-205ENST00000586993 PRR5LQ6MZQ0 368 aa28.98■■■□□ 2.23
DDX39A-205ENST00000586993 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
DDX39A-205ENST00000586993 ZNF652Q9Y2D9 606 aa28.98■■■□□ 2.23
DDX39A-205ENST00000586993 DLEC1Q9Y238 1755 aa28.98■■■□□ 2.23
DDX39A-205ENST00000586993 MAP3K15Q6ZN16 1313 aa28.97■■■□□ 2.23
DDX39A-205ENST00000586993 DUSP27Q5VZP5 1158 aa28.97■■■□□ 2.23
DDX39A-205ENST00000586993 HOXB7P09629 217 aa28.96■■■□□ 2.23
DDX39A-205ENST00000586993 COL11A2P13942 1736 aaPredicted RBP28.95■■■□□ 2.23
DDX39A-205ENST00000586993 NCBP3Q53F19 620 aaKnown RBP28.95■■■□□ 2.22
DDX39A-205ENST00000586993 ZBTB3Q9H5J0 574 aa28.95■■■□□ 2.22
DDX39A-205ENST00000586993 CHPF2Q9P2E5 772 aa28.95■■■□□ 2.22
DDX39A-205ENST00000586993 SALL2Q9Y467 1007 aaPredicted RBP28.95■■■□□ 2.22
DDX39A-205ENST00000586993 ERVV-1B6SEH8 477 aa28.94■■■□□ 2.22
DDX39A-205ENST00000586993 C1QTNF8P60827 252 aa28.94■■■□□ 2.22
DDX39A-205ENST00000586993 HDGFL1Q5TGJ6 251 aa28.94■■■□□ 2.22
DDX39A-205ENST00000586993 KIF6Q6ZMV9 814 aa28.94■■■□□ 2.22
DDX39A-205ENST00000586993 TSR2Q969E8 191 aaKnown RBP28.94■■■□□ 2.22
DDX39A-205ENST00000586993 NIP7Q9Y221 180 aaKnown RBP eCLIP28.94■■■□□ 2.22
DDX39A-205ENST00000586993 ARFGEF1Q9Y6D6 1849 aa28.94■■■□□ 2.22
DDX39A-205ENST00000586993 CNBD1Q8NA66 436 aa28.93■■■□□ 2.22
DDX39A-205ENST00000586993 C8orf58Q8NAV2 365 aa28.93■■■□□ 2.22
DDX39A-205ENST00000586993 DDX21Q9NR30 783 aaKnown RBP eCLIP28.93■■■□□ 2.22
DDX39A-205ENST00000586993 BCS1LQ9Y276 419 aa28.93■■■□□ 2.22
DDX39A-205ENST00000586993 ATP10DQ9P241 1426 aa28.93■■■□□ 2.22
DDX39A-205ENST00000586993 ELL2O00472 640 aaPredicted RBP28.91■■■□□ 2.22
DDX39A-205ENST00000586993 NBPF5PQ86XG9 351 aaPredicted RBP28.9■■■□□ 2.22
DDX39A-205ENST00000586993 XAGE3Q8WTP9 111 aa28.9■■■□□ 2.22
DDX39A-205ENST00000586993 PIM2Q9P1W9 311 aa28.9■■■□□ 2.22
DDX39A-205ENST00000586993 IL16Q14005 1332 aa28.9■■■□□ 2.22
DDX39A-205ENST00000586993 COPS6Q7L5N1 327 aa28.89■■■□□ 2.22
DDX39A-205ENST00000586993 BRIP1Q9BX63 1249 aa28.89■■■□□ 2.22
DDX39A-205ENST00000586993 FAM177BA6PVY3 158 aa28.88■■■□□ 2.21
DDX39A-205ENST00000586993 C2CD5Q86YS7 1000 aa28.88■■■□□ 2.21
DDX39A-205ENST00000586993 TSPYL6Q8N831 410 aa28.88■■■□□ 2.21
DDX39A-205ENST00000586993 UBN2Q6ZU65 1347 aa28.88■■■□□ 2.21
DDX39A-205ENST00000586993 GPTP24298 496 aa28.87■■■□□ 2.21
DDX39A-205ENST00000586993 AIMP1Q12904 312 aaKnown RBP28.87■■■□□ 2.21
DDX39A-205ENST00000586993 GIGYF2Q6Y7W6 1299 aaKnown RBP28.87■■■□□ 2.21
DDX39A-205ENST00000586993 ANKRD36CQ5JPF3 1778 aa28.87■■■□□ 2.21
DDX39A-205ENST00000586993 DALRD3Q5D0E6 543 aaKnown RBP28.86■■■□□ 2.21
DDX39A-205ENST00000586993 DBF4Q9UBU7 674 aaPredicted RBP28.86■■■□□ 2.21
DDX39A-205ENST00000586993 NPHP1O15259 732 aa28.85■■■□□ 2.21
DDX39A-205ENST00000586993 ST5P78524 1137 aa28.85■■■□□ 2.21
DDX39A-205ENST00000586993 ZNF34Q8IZ26 560 aa28.85■■■□□ 2.21
DDX39A-205ENST00000586993 TNRC6CQ9HCJ0 1690 aaKnown RBP28.85■■■□□ 2.21
DDX39A-205ENST00000586993 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
DDX39A-205ENST00000586993 H0YIN7 160 aa28.83■■■□□ 2.21
DDX39A-205ENST00000586993 CCER2I3L3R5 266 aa28.83■■■□□ 2.21
DDX39A-205ENST00000586993 PDE6BP35913 854 aa28.83■■■□□ 2.21
DDX39A-205ENST00000586993 SPINK5Q9NQ38 1064 aaPredicted RBP28.83■■■□□ 2.21
DDX39A-205ENST00000586993 FANCIQ9NVI1 1328 aa28.83■■■□□ 2.21
DDX39A-205ENST00000586993 ABCC12Q96J65 1359 aa28.83■■■□□ 2.21
DDX39A-205ENST00000586993 TPTE2Q6XPS3 522 aa28.82■■■□□ 2.2
DDX39A-205ENST00000586993 SUSD4Q5VX71 490 aa28.81■■■□□ 2.2
DDX39A-205ENST00000586993 HYPKQ9NX55 129 aa28.81■■■□□ 2.2
DDX39A-205ENST00000586993 IBTKQ9P2D0 1353 aaPredicted RBP28.8■■■□□ 2.2
DDX39A-205ENST00000586993 NUTM1Q86Y26 1132 aa28.8■■■□□ 2.2
DDX39A-205ENST00000586993 CACNA1SQ13698 1873 aa28.8■■■□□ 2.2
DDX39A-205ENST00000586993 ARFGEF2Q9Y6D5 1785 aa28.8■■■□□ 2.2
DDX39A-205ENST00000586993 ZNF521Q96K83 1311 aa28.79■■■□□ 2.2
DDX39A-205ENST00000586993 ADCY9O60503 1353 aa28.78■■■□□ 2.2
DDX39A-205ENST00000586993 NTSR2O95665 410 aa28.78■■■□□ 2.2
DDX39A-205ENST00000586993 SRGNP10124 158 aa28.78■■■□□ 2.2
DDX39A-205ENST00000586993 ARHGAP27Q6ZUM4 889 aa28.78■■■□□ 2.2
DDX39A-205ENST00000586993 TTLL6Q8N841 843 aa28.78■■■□□ 2.2
DDX39A-205ENST00000586993 PHAXQ9H814 394 aaKnown RBP28.78■■■□□ 2.2
DDX39A-205ENST00000586993 KLRG2A4D1S0 409 aaPredicted RBP28.77■■■□□ 2.2
DDX39A-205ENST00000586993 ERFEQ4G0M1 354 aa28.77■■■□□ 2.2
DDX39A-205ENST00000586993 DIEXFQ68CQ4 756 aaKnown RBP28.77■■■□□ 2.2
DDX39A-205ENST00000586993 PLBD2Q8NHP8 589 aa28.77■■■□□ 2.2
DDX39A-205ENST00000586993 ZNF622Q969S3 477 aaKnown RBP eCLIP28.77■■■□□ 2.22e-18■□□□□ 10.6
DDX39A-205ENST00000586993 NYXQ9GZU5 481 aa28.77■■■□□ 2.2
DDX39A-205ENST00000586993 PDZRN3Q9UPQ7 1066 aa28.77■■■□□ 2.2
DDX39A-205ENST00000586993 SLX4Q8IY92 1834 aa28.77■■■□□ 2.2
DDX39A-205ENST00000586993 TWISTNBQ3B726 338 aaPredicted RBP28.76■■■□□ 2.19
DDX39A-205ENST00000586993 GPBP1L1Q9HC44 474 aaPredicted RBP28.76■■■□□ 2.19
DDX39A-205ENST00000586993 PARP10Q53GL7 1025 aa28.75■■■□□ 2.19
DDX39A-205ENST00000586993 CCDC30Q5VVM6 783 aa28.75■■■□□ 2.19
DDX39A-205ENST00000586993 ANKRD13DQ6ZTN6 518 aa28.75■■■□□ 2.19
DDX39A-205ENST00000586993 TCERG1O14776 1098 aaKnown RBP28.74■■■□□ 2.19
DDX39A-205ENST00000586993 GTF2E1P29083 439 aaPredicted RBP28.74■■■□□ 2.19
DDX39A-205ENST00000586993 TCIRG1Q13488 830 aa28.74■■■□□ 2.19
DDX39A-205ENST00000586993 STYK1Q6J9G0 422 aa28.74■■■□□ 2.19
DDX39A-205ENST00000586993 NLRP10Q86W26 655 aa28.74■■■□□ 2.19
DDX39A-205ENST00000586993 RIC1Q4ADV7 1423 aa28.74■■■□□ 2.19
DDX39A-205ENST00000586993 HSP90AB3PQ58FF7 597 aa28.73■■■□□ 2.19
DDX39A-205ENST00000586993 MIER1Q8N108 512 aa28.73■■■□□ 2.19
DDX39A-205ENST00000586993 ZNF526Q8TF50 670 aaPredicted RBP28.73■■■□□ 2.19
DDX39A-205ENST00000586993 EXOSC9Q06265 439 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms