RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 TMPOP42166 694 aaKnown RBP24.49■■□□□ 1.51
ATG4D-203ENST00000585752 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
ATG4D-203ENST00000585752 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
ATG4D-203ENST00000585752 CCDC24Q8N4L8 307 aa24.49■■□□□ 1.51
ATG4D-203ENST00000585752 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
ATG4D-203ENST00000585752 GTF2E1P29083 439 aaPredicted RBP24.48■■□□□ 1.51
ATG4D-203ENST00000585752 CACNA1SQ13698 1873 aa24.48■■□□□ 1.51
ATG4D-203ENST00000585752 CCDC88AQ3V6T2 1871 aa24.48■■□□□ 1.51
ATG4D-203ENST00000585752 KIF6Q6ZMV9 814 aa24.48■■□□□ 1.51
ATG4D-203ENST00000585752 RUNDC1Q96C34 613 aa24.48■■□□□ 1.51
ATG4D-203ENST00000585752 RNF181Q9P0P0 153 aa24.48■■□□□ 1.51
ATG4D-203ENST00000585752 NIP7Q9Y221 180 aaKnown RBP eCLIP24.48■■□□□ 1.51
ATG4D-203ENST00000585752 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
ATG4D-203ENST00000585752 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
ATG4D-203ENST00000585752 TPTE2Q6XPS3 522 aa24.47■■□□□ 1.51
ATG4D-203ENST00000585752 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
ATG4D-203ENST00000585752 MYL6BP14649 208 aa24.46■■□□□ 1.51
ATG4D-203ENST00000585752 RGL2O15211 777 aa24.45■■□□□ 1.5
ATG4D-203ENST00000585752 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
ATG4D-203ENST00000585752 CNKSR1Q969H4 720 aa24.45■■□□□ 1.5
ATG4D-203ENST00000585752 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
ATG4D-203ENST00000585752 NUP98P52948 1817 aa24.45■■□□□ 1.5
ATG4D-203ENST00000585752 FAM177BA6PVY3 158 aa24.44■■□□□ 1.5
ATG4D-203ENST00000585752 ZNF219Q9P2Y4 722 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-203ENST00000585752 ADAMTS8Q9UP79 889 aa24.44■■□□□ 1.5
ATG4D-203ENST00000585752 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
ATG4D-203ENST00000585752 KDM2BQ8NHM5 1336 aa24.43■■□□□ 1.5
ATG4D-203ENST00000585752 C16orf71Q8IYS4 520 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-203ENST00000585752 EIF2S2P20042 333 aaKnown RBP24.42■■□□□ 1.5
ATG4D-203ENST00000585752 RASSF7Q02833 373 aa24.41■■□□□ 1.5
ATG4D-203ENST00000585752 MASTLQ96GX5 879 aa24.41■■□□□ 1.5
ATG4D-203ENST00000585752 NYXQ9GZU5 481 aa24.41■■□□□ 1.5
ATG4D-203ENST00000585752 ERBB4Q15303 1308 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 ERVV-1B6SEH8 477 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 LMNB1P20700 586 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 HLFQ16534 295 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 CCDC184Q52MB2 194 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 STYK1Q6J9G0 422 aa24.4■■□□□ 1.5
ATG4D-203ENST00000585752 COL11A2P13942 1736 aaPredicted RBP24.4■■□□□ 1.5
ATG4D-203ENST00000585752 MAP3K15Q6ZN16 1313 aa24.39■■□□□ 1.5
ATG4D-203ENST00000585752 C21orf2O43822 256 aa24.39■■□□□ 1.49
ATG4D-203ENST00000585752 SOGA3Q5TF21 947 aa24.38■■□□□ 1.49
ATG4D-203ENST00000585752 KIF3CO14782 793 aa24.37■■□□□ 1.49
ATG4D-203ENST00000585752 SRGNP10124 158 aa24.37■■□□□ 1.49
ATG4D-203ENST00000585752 ZBTB3Q9H5J0 574 aa24.37■■□□□ 1.49
ATG4D-203ENST00000585752 NPR1P16066 1061 aa24.36■■□□□ 1.49
ATG4D-203ENST00000585752 ARFGEF2Q9Y6D5 1785 aa24.36■■□□□ 1.49
ATG4D-203ENST00000585752 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
ATG4D-203ENST00000585752 SLX4Q8IY92 1834 aa24.35■■□□□ 1.49
ATG4D-203ENST00000585752 TOMM70O94826 608 aa24.35■■□□□ 1.49
ATG4D-203ENST00000585752 TTLL7Q6ZT98 887 aa24.35■■□□□ 1.49
ATG4D-203ENST00000585752 NMRK2Q9NPI5 230 aa24.35■■□□□ 1.49
ATG4D-203ENST00000585752 PRPF40BQ6NWY9 871 aaKnown RBP24.34■■□□□ 1.49
ATG4D-203ENST00000585752 FER1L6Q2WGJ9 1857 aa24.34■■□□□ 1.49
ATG4D-203ENST00000585752 DICER1Q9UPY3 1922 aaKnown RBP24.33■■□□□ 1.49
ATG4D-203ENST00000585752 GPTP24298 496 aa24.33■■□□□ 1.49
ATG4D-203ENST00000585752 ALDH1B1P30837 517 aa24.33■■□□□ 1.49
ATG4D-203ENST00000585752 NECTIN2Q92692 538 aa24.33■■□□□ 1.49
ATG4D-203ENST00000585752 TAOK3Q9H2K8 898 aa24.33■■□□□ 1.49
ATG4D-203ENST00000585752 TNRC6CQ9HCJ0 1690 aaKnown RBP24.33■■□□□ 1.49
ATG4D-203ENST00000585752 TIAM2Q8IVF5 1701 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 DPY19L2Q6NUT2 758 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 PPP1R42Q7Z4L9 355 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 FAM9BQ8IZU0 186 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 RRAGCQ9HB90 399 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 TRIM35Q9UPQ4 493 aa24.32■■□□□ 1.48
ATG4D-203ENST00000585752 HSPA6P17066 643 aa24.31■■□□□ 1.48
ATG4D-203ENST00000585752 CALD1Q05682 793 aaKnown RBP24.31■■□□□ 1.48
ATG4D-203ENST00000585752 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
ATG4D-203ENST00000585752 CHL1O00533 1208 aa24.3■■□□□ 1.48
ATG4D-203ENST00000585752 RPGRQ92834 1020 aaKnown RBP24.3■■□□□ 1.48
ATG4D-203ENST00000585752 NFKBIEO00221 500 aa24.29■■□□□ 1.48
ATG4D-203ENST00000585752 AIMP1Q12904 312 aaKnown RBP24.29■■□□□ 1.48
ATG4D-203ENST00000585752 ERFEQ4G0M1 354 aa24.29■■□□□ 1.48
ATG4D-203ENST00000585752 CCDC93Q567U6 631 aa24.29■■□□□ 1.48
ATG4D-203ENST00000585752 NUTM1Q86Y26 1132 aa24.29■■□□□ 1.48
ATG4D-203ENST00000585752 GLTPD2A6NH11 291 aa24.28■■□□□ 1.48
ATG4D-203ENST00000585752 CCER2I3L3R5 266 aa24.28■■□□□ 1.48
ATG4D-203ENST00000585752 PARP10Q53GL7 1025 aa24.28■■□□□ 1.48
ATG4D-203ENST00000585752 HSP90AB3PQ58FF7 597 aa24.28■■□□□ 1.48
ATG4D-203ENST00000585752 APAF1O14727 1248 aa24.27■■□□□ 1.48
ATG4D-203ENST00000585752 ANXA1P04083 346 aa24.27■■□□□ 1.48
ATG4D-203ENST00000585752 CFAP44Q96MT7 982 aa24.27■■□□□ 1.48
ATG4D-203ENST00000585752 KLRG2A4D1S0 409 aaPredicted RBP24.26■■□□□ 1.47
ATG4D-203ENST00000585752 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
ATG4D-203ENST00000585752 COPS6Q7L5N1 327 aa24.26■■□□□ 1.47
ATG4D-203ENST00000585752 ZNF34Q8IZ26 560 aa24.26■■□□□ 1.47
ATG4D-203ENST00000585752 RBM46Q8TBY0 533 aaKnown RBP24.26■■□□□ 1.47
ATG4D-203ENST00000585752 LTBP3Q9NS15 1303 aa24.26■■□□□ 1.47
ATG4D-203ENST00000585752 ANKRD36CQ5JPF3 1778 aa24.25■■□□□ 1.47
ATG4D-203ENST00000585752 PDIA6Q15084 440 aa24.25■■□□□ 1.47
ATG4D-203ENST00000585752 SUSD4Q5VX71 490 aa24.25■■□□□ 1.47
ATG4D-203ENST00000585752 TMX4Q9H1E5 349 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-203ENST00000585752 DDX21Q9NR30 783 aaKnown RBP eCLIP24.25■■□□□ 1.47
ATG4D-203ENST00000585752 IBTKQ9P2D0 1353 aaPredicted RBP24.25■■□□□ 1.47
ATG4D-203ENST00000585752 HOXB7P09629 217 aa24.24■■□□□ 1.47
ATG4D-203ENST00000585752 VEGFAP15692 232 aaPredicted RBP24.24■■□□□ 1.47
ATG4D-203ENST00000585752 GNAI1P63096 354 aa24.24■■□□□ 1.47
ATG4D-203ENST00000585752 PROSER3Q2NL68 480 aa24.24■■□□□ 1.47
ATG4D-203ENST00000585752 RTKN2Q8IZC4 609 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms