RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PHACTR1Q9C0D0 580 aa8.5□□□□□ -1.05
SMAD4-203ENST00000585448 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
SMAD4-203ENST00000585448 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
SMAD4-203ENST00000585448 PRMT3O60678 531 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 SSFA2P28290 1259 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 VEGFBP49765 207 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 CCDC136Q96JN2 1154 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 CFHR5Q9BXR6 569 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 GPAMQ9HCL2 828 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
SMAD4-203ENST00000585448 A0A1W2PNR3 127 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 WIPF1O43516 503 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 ATP2B4P23634 1241 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 IER5Q5VY09 327 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 FOXR1Q6PIV2 292 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 CHMP7Q8WUX9 453 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-203ENST00000585448 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 RUBCNLQ9H714 662 aa8.48□□□□□ -1.05
SMAD4-203ENST00000585448 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
SMAD4-203ENST00000585448 PDIA4P13667 645 aaKnown RBP8.47□□□□□ -1.05
SMAD4-203ENST00000585448 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
SMAD4-203ENST00000585448 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
SMAD4-203ENST00000585448 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
SMAD4-203ENST00000585448 QTRT2Q9H974 415 aaKnown RBP8.47□□□□□ -1.05
SMAD4-203ENST00000585448 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
SMAD4-203ENST00000585448 CDC14CA4D256 554 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-203ENST00000585448 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 VTI1AQ96AJ9 217 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 TRERF1Q96PN7 1200 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 ATXN7L1Q9ULK2 861 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-203ENST00000585448 PHF24Q9UPV7 400 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 PCDHGC4Q9Y5F7 938 aa8.46□□□□□ -1.06
SMAD4-203ENST00000585448 LGR5O75473 907 aa8.45□□□□□ -1.06
SMAD4-203ENST00000585448 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
SMAD4-203ENST00000585448 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
SMAD4-203ENST00000585448 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
SMAD4-203ENST00000585448 EFSO43281 561 aa8.44□□□□□ -1.06
SMAD4-203ENST00000585448 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
SMAD4-203ENST00000585448 ZCCHC2Q9C0B9 1178 aaKnown RBP8.44□□□□□ -1.06
SMAD4-203ENST00000585448 TGFBR3LH3BV60 316 aa8.43□□□□□ -1.06
SMAD4-203ENST00000585448 GAS6Q14393 721 aa8.43□□□□□ -1.06
SMAD4-203ENST00000585448 FAM182BQ5T319 152 aa8.43□□□□□ -1.06
SMAD4-203ENST00000585448 SUSD3Q96L08 255 aa8.43□□□□□ -1.06
SMAD4-203ENST00000585448 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-203ENST00000585448 KCNQ4P56696 695 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 TNP2Q05952 138 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 C11orf91Q3C1V1 193 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 MBIPQ9NS73 344 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 GJA3Q9Y6H8 435 aa8.42□□□□□ -1.06
SMAD4-203ENST00000585448 BNIP3LO60238 219 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 GMPRP36959 345 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 FGD1P98174 961 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 COX20Q5RI15 118 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-203ENST00000585448 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 DMGDHQ9UI17 866 aaKnown RBP8.41□□□□□ -1.06
SMAD4-203ENST00000585448 LRFN2Q9ULH4 789 aa8.41□□□□□ -1.06
SMAD4-203ENST00000585448 KRT76Q01546 638 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 SRSF11Q05519 484 aaKnown RBP8.4□□□□□ -1.06
SMAD4-203ENST00000585448 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 TRAIPQ9BWF2 469 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 NEUROD4Q9HD90 331 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 BCS1LQ9Y276 419 aa8.4□□□□□ -1.06
SMAD4-203ENST00000585448 BRD1O95696 1058 aa8.39□□□□□ -1.07
SMAD4-203ENST00000585448 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
SMAD4-203ENST00000585448 MAPTP10636 758 aaKnown RBP8.39□□□□□ -1.07
SMAD4-203ENST00000585448 TYRO3Q06418 890 aa8.39□□□□□ -1.07
SMAD4-203ENST00000585448 DGKZQ13574 1117 aa8.39□□□□□ -1.07
SMAD4-203ENST00000585448 LRRC69Q6ZNQ3 347 aa8.39□□□□□ -1.07
SMAD4-203ENST00000585448 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 GPR25O00155 361 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 FGFR3P22607 806 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 BRD2P25440 801 aaKnown RBP8.38□□□□□ -1.07
SMAD4-203ENST00000585448 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 BTLAQ7Z6A9 289 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 ZNF280CQ8ND82 737 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
SMAD4-203ENST00000585448 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-203ENST00000585448 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 MX2P20592 715 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 TAF7LQ5H9L4 462 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 CAPN12Q6ZSI9 719 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 ABHD17AQ96GS6 310 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 MKNK1Q9BUB5 465 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 SAP130Q9H0E3 1048 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 EFCC1Q9HA90 598 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 LRRC4BQ9NT99 713 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 EGFL7Q9UHF1 273 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 HCN2Q9UL51 889 aa8.37□□□□□ -1.07
SMAD4-203ENST00000585448 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
SMAD4-203ENST00000585448 NPR3P17342 541 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms