RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
ERBB2-217ENST00000584099 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
ERBB2-217ENST00000584099 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
ERBB2-217ENST00000584099 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
ERBB2-217ENST00000584099 RIPK4P57078 832 aa17.05■□□□□ 0.32
ERBB2-217ENST00000584099 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
ERBB2-217ENST00000584099 NFKBIEO00221 500 aa17.04■□□□□ 0.32
ERBB2-217ENST00000584099 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
ERBB2-217ENST00000584099 FSTL1Q12841 308 aa17.04■□□□□ 0.32
ERBB2-217ENST00000584099 ZNF622Q969S3 477 aaKnown RBP eCLIP17.04■□□□□ 0.32
ERBB2-217ENST00000584099 NIP7Q9Y221 180 aaKnown RBP eCLIP17.04■□□□□ 0.32
ERBB2-217ENST00000584099 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
ERBB2-217ENST00000584099 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
ERBB2-217ENST00000584099 NPR1P16066 1061 aa17.03■□□□□ 0.32
ERBB2-217ENST00000584099 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
ERBB2-217ENST00000584099 NMRK2Q9NPI5 230 aa17.03■□□□□ 0.32
ERBB2-217ENST00000584099 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
ERBB2-217ENST00000584099 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
ERBB2-217ENST00000584099 GLTPD2A6NH11 291 aa17.02■□□□□ 0.32
ERBB2-217ENST00000584099 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
ERBB2-217ENST00000584099 APLP1P51693 650 aa17.02■□□□□ 0.32
ERBB2-217ENST00000584099 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
ERBB2-217ENST00000584099 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
ERBB2-217ENST00000584099 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
ERBB2-217ENST00000584099 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
ERBB2-217ENST00000584099 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
ERBB2-217ENST00000584099 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
ERBB2-217ENST00000584099 C21orf2O43822 256 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 ALDH1B1P30837 517 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 RASSF7Q02833 373 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
ERBB2-217ENST00000584099 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
ERBB2-217ENST00000584099 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-217ENST00000584099 HLFQ16534 295 aa16.99■□□□□ 0.31
ERBB2-217ENST00000584099 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
ERBB2-217ENST00000584099 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
ERBB2-217ENST00000584099 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-217ENST00000584099 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 CHL1O00533 1208 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 HOXB7P09629 217 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-217ENST00000584099 PRELPP51888 382 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
ERBB2-217ENST00000584099 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
ERBB2-217ENST00000584099 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
ERBB2-217ENST00000584099 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
ERBB2-217ENST00000584099 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
ERBB2-217ENST00000584099 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
ERBB2-217ENST00000584099 LRP10Q7Z4F1 713 aa16.97■□□□□ 0.31
ERBB2-217ENST00000584099 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
ERBB2-217ENST00000584099 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-217ENST00000584099 PDIA6Q15084 440 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 ZNF34Q8IZ26 560 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 RRAGCQ9HB90 399 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
ERBB2-217ENST00000584099 MYL6BP14649 208 aa16.95■□□□□ 0.3
ERBB2-217ENST00000584099 HSP90AB3PQ58FF7 597 aa16.95■□□□□ 0.3
ERBB2-217ENST00000584099 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
ERBB2-217ENST00000584099 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
ERBB2-217ENST00000584099 PPP1R42Q7Z4L9 355 aa16.94■□□□□ 0.3
ERBB2-217ENST00000584099 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
ERBB2-217ENST00000584099 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
ERBB2-217ENST00000584099 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
ERBB2-217ENST00000584099 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
ERBB2-217ENST00000584099 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
ERBB2-217ENST00000584099 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
ERBB2-217ENST00000584099 DLG5Q8TDM6 1919 aa16.93■□□□□ 0.3
ERBB2-217ENST00000584099 TNRC6CQ9HCJ0 1690 aaKnown RBP16.93■□□□□ 0.3
ERBB2-217ENST00000584099 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
ERBB2-217ENST00000584099 SBF1O95248 1867 aa16.93■□□□□ 0.3
ERBB2-217ENST00000584099 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
ERBB2-217ENST00000584099 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
ERBB2-217ENST00000584099 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
ERBB2-217ENST00000584099 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
ERBB2-217ENST00000584099 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
ERBB2-217ENST00000584099 NTSR2O95665 410 aa16.91■□□□□ 0.3
ERBB2-217ENST00000584099 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
ERBB2-217ENST00000584099 SUSD4Q5VX71 490 aa16.91■□□□□ 0.3
ERBB2-217ENST00000584099 PSMD1Q99460 953 aa16.91■□□□□ 0.3
ERBB2-217ENST00000584099 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
ERBB2-217ENST00000584099 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
ERBB2-217ENST00000584099 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
ERBB2-217ENST00000584099 RPGRQ92834 1020 aaKnown RBP16.9■□□□□ 0.3
ERBB2-217ENST00000584099 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-217ENST00000584099 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
ERBB2-217ENST00000584099 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 GPTP24298 496 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 NEUROD2Q15784 382 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
ERBB2-217ENST00000584099 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms