RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 CIAPIN1Q6FI81 312 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 BICDL1Q6ZP65 573 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 USP50Q70EL3 339 aaPredicted RBP8.87□□□□□ -0.99
NUP85-221ENST00000583548 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 MASTLQ96GX5 879 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 EMILIN1Q9Y6C2 1016 aa8.87□□□□□ -0.99
NUP85-221ENST00000583548 CASP8AP2Q9UKL3 1982 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 ST20-MTHFSA0A0A6YYL1 179 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 SRGNP10124 158 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 MTHFSP49914 203 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 EIF6P56537 245 aaKnown RBP8.86□□□□□ -0.99
NUP85-221ENST00000583548 ST5P78524 1137 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 PKN2Q16513 984 aaKnown RBP8.86□□□□□ -0.99
NUP85-221ENST00000583548 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
NUP85-221ENST00000583548 CTU1Q7Z7A3 348 aaKnown RBP8.86□□□□□ -0.99
NUP85-221ENST00000583548 TRPM7Q96QT4 1865 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 CYP19A1P11511 503 aaPredicted RBP8.85□□□□□ -0.99
NUP85-221ENST00000583548 IARSP41252 1262 aaKnown RBP8.85□□□□□ -0.99
NUP85-221ENST00000583548 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 ZNF530Q6P9A1 599 aaPredicted RBP8.85□□□□□ -0.99
NUP85-221ENST00000583548 DNAJC10Q8IXB1 793 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 CNBD1Q8NA66 436 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 ARFGEF2Q9Y6D5 1785 aa8.85□□□□□ -0.99
NUP85-221ENST00000583548 COL11A2P13942 1736 aaPredicted RBP8.85□□□□□ -0.99
NUP85-221ENST00000583548 DLL1O00548 723 aa8.84□□□□□ -0.99
NUP85-221ENST00000583548 CELF2O95319 508 aaKnown RBP8.84□□□□□ -0.99
NUP85-221ENST00000583548 ANKRD31Q8N7Z5 1873 aa8.84□□□□□ -0.99
NUP85-221ENST00000583548 ZNF277Q9NRM2 450 aaPredicted RBP8.84□□□□□ -0.99
NUP85-221ENST00000583548 KIF20BQ96Q89 1820 aa8.83□□□□□ -1
NUP85-221ENST00000583548 TRAF5O00463 557 aa8.83□□□□□ -1
NUP85-221ENST00000583548 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -1
NUP85-221ENST00000583548 VSIG10Q8N0Z9 540 aa8.83□□□□□ -1
NUP85-221ENST00000583548 C7orf43Q8WVR3 580 aa8.83□□□□□ -1
NUP85-221ENST00000583548 SETDB2Q96T68 719 aa8.83□□□□□ -1
NUP85-221ENST00000583548 ZBTB1Q9Y2K1 713 aa8.83□□□□□ -1
NUP85-221ENST00000583548 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
NUP85-221ENST00000583548 SLX4Q8IY92 1834 aa8.82□□□□□ -1
NUP85-221ENST00000583548 NPR1P16066 1061 aa8.82□□□□□ -1
NUP85-221ENST00000583548 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -1
NUP85-221ENST00000583548 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
NUP85-221ENST00000583548 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
NUP85-221ENST00000583548 ADARB2Q9NS39 739 aaKnown RBP8.82□□□□□ -1
NUP85-221ENST00000583548 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
NUP85-221ENST00000583548 STARD3NLO95772 234 aa8.81□□□□□ -1
NUP85-221ENST00000583548 EPS15P42566 896 aa8.81□□□□□ -1
NUP85-221ENST00000583548 SCNN1DP51172 638 aa8.81□□□□□ -1
NUP85-221ENST00000583548 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
NUP85-221ENST00000583548 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
NUP85-221ENST00000583548 CC2D2BQ6DHV5 1058 aa8.81□□□□□ -1
NUP85-221ENST00000583548 REM2Q8IYK8 340 aaPredicted RBP8.81□□□□□ -1
NUP85-221ENST00000583548 SYNE4Q8N205 404 aa8.81□□□□□ -1
NUP85-221ENST00000583548 CCDC102AQ96A19 550 aa8.81□□□□□ -1
NUP85-221ENST00000583548 PSMD1Q99460 953 aa8.81□□□□□ -1
NUP85-221ENST00000583548 BCORQ6W2J9 1755 aa8.81□□□□□ -1
NUP85-221ENST00000583548 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
NUP85-221ENST00000583548 ALDH1B1P30837 517 aa8.8□□□□□ -1
NUP85-221ENST00000583548 HUNKP57058 714 aa8.8□□□□□ -1
NUP85-221ENST00000583548 EIF4A2Q14240 407 aaKnown RBP8.8□□□□□ -1
NUP85-221ENST00000583548 CDC37L1Q7L3B6 337 aa8.8□□□□□ -1
NUP85-221ENST00000583548 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
NUP85-221ENST00000583548 ZC3H15Q8WU90 426 aaKnown RBP8.8□□□□□ -1
NUP85-221ENST00000583548 SCN7AQ01118 1682 aa8.79□□□□□ -1
NUP85-221ENST00000583548 TRPA1O75762 1119 aa8.79□□□□□ -1
NUP85-221ENST00000583548 TESK2Q96S53 571 aa8.79□□□□□ -1
NUP85-221ENST00000583548 ZNF408Q9H9D4 720 aa8.79□□□□□ -1
NUP85-221ENST00000583548 SLC52A2Q9HAB3 445 aa8.79□□□□□ -1
NUP85-221ENST00000583548 RNF186Q9NXI6 227 aa8.79□□□□□ -1
NUP85-221ENST00000583548 PGAP2Q9UHJ9 254 aa8.79□□□□□ -1
NUP85-221ENST00000583548 HDAC9Q9UKV0 1011 aa8.79□□□□□ -1
NUP85-221ENST00000583548 CACNA1SQ13698 1873 aa8.79□□□□□ -1
NUP85-221ENST00000583548 CDHR2Q9BYE9 1310 aa8.79□□□□□ -1
NUP85-221ENST00000583548 CDCA8Q53HL2 280 aa8.78□□□□□ -1
NUP85-221ENST00000583548 RGMBQ6NW40 437 aa8.78□□□□□ -1
NUP85-221ENST00000583548 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
NUP85-221ENST00000583548 TEX13AQ9BXU3 409 aaPredicted RBP8.78□□□□□ -1
NUP85-221ENST00000583548 GLIS2Q9BZE0 524 aaPredicted RBP8.78□□□□□ -1
NUP85-221ENST00000583548 GPRC5DQ9NZD1 345 aa8.78□□□□□ -1
NUP85-221ENST00000583548 POLKQ9UBT6 870 aa8.78□□□□□ -1
NUP85-221ENST00000583548 KLRG2A4D1S0 409 aaPredicted RBP8.77□□□□□ -1.01
NUP85-221ENST00000583548 IL6STP40189 918 aaPredicted RBP8.77□□□□□ -1.01
NUP85-221ENST00000583548 KIF23Q02241 960 aaPredicted RBP8.77□□□□□ -1.01
NUP85-221ENST00000583548 NBPF5PQ86XG9 351 aaPredicted RBP8.77□□□□□ -1.01
NUP85-221ENST00000583548 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
NUP85-221ENST00000583548 FAM155AB1AL88 458 aaPredicted RBP8.76□□□□□ -1.01
NUP85-221ENST00000583548 FBXO46Q6PJ61 603 aaPredicted RBP8.76□□□□□ -1.01
NUP85-221ENST00000583548 TPTE2Q6XPS3 522 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 NIM1KQ8IY84 436 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 C2orf69Q8N8R5 385 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 ZIC5Q96T25 663 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 VPS33BQ9H267 617 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
NUP85-221ENST00000583548 ZNF157P51786 506 aaPredicted RBP8.75□□□□□ -1.01
NUP85-221ENST00000583548 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
NUP85-221ENST00000583548 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms