RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PROM2Q8N271 834 aa18.22■□□□□ 0.51
MKS1-211ENST00000581761 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
MKS1-211ENST00000581761 UBR2Q8IWV8 1755 aa18.22■□□□□ 0.51
MKS1-211ENST00000581761 PLSCR1O15162 318 aa18.21■□□□□ 0.51
MKS1-211ENST00000581761 R3HDM1Q15032 1099 aaKnown RBP18.21■□□□□ 0.51
MKS1-211ENST00000581761 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
MKS1-211ENST00000581761 SYTL4Q96C24 671 aaPredicted RBP18.21■□□□□ 0.51
MKS1-211ENST00000581761 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
MKS1-211ENST00000581761 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
MKS1-211ENST00000581761 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
MKS1-211ENST00000581761 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
MKS1-211ENST00000581761 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
MKS1-211ENST00000581761 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
MKS1-211ENST00000581761 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
MKS1-211ENST00000581761 LRP10Q7Z4F1 713 aa18.17■□□□□ 0.5
MKS1-211ENST00000581761 PIGBQ92521 554 aa18.17■□□□□ 0.5
MKS1-211ENST00000581761 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
MKS1-211ENST00000581761 RREB1Q92766 1687 aa18.17■□□□□ 0.5
MKS1-211ENST00000581761 BTAF1O14981 1849 aa18.16■□□□□ 0.5
MKS1-211ENST00000581761 PNMA6EA0A0J9YXQ4 647 aa18.16■□□□□ 0.5
MKS1-211ENST00000581761 APBB1O00213 710 aa18.16■□□□□ 0.5
MKS1-211ENST00000581761 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
MKS1-211ENST00000581761 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
MKS1-211ENST00000581761 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
MKS1-211ENST00000581761 MYD88Q99836 296 aa18.16■□□□□ 0.5
MKS1-211ENST00000581761 SMARCA5O60264 1052 aaPredicted RBP18.15■□□□□ 0.5
MKS1-211ENST00000581761 TXNRD1Q16881 649 aa18.15■□□□□ 0.5
MKS1-211ENST00000581761 ANKRD13DQ6ZTN6 518 aa18.15■□□□□ 0.5
MKS1-211ENST00000581761 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
MKS1-211ENST00000581761 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
MKS1-211ENST00000581761 NUP188Q5SRE5 1749 aa18.15■□□□□ 0.5
MKS1-211ENST00000581761 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.5
MKS1-211ENST00000581761 ITGB4P16144 1822 aa18.14■□□□□ 0.5
MKS1-211ENST00000581761 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
MKS1-211ENST00000581761 BCL11AQ9H165 835 aa18.14■□□□□ 0.49
MKS1-211ENST00000581761 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
MKS1-211ENST00000581761 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
MKS1-211ENST00000581761 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
MKS1-211ENST00000581761 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 POLA2Q14181 598 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
MKS1-211ENST00000581761 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
MKS1-211ENST00000581761 RGPD3A6NKT7 1758 aaPredicted RBP18.12■□□□□ 0.49
MKS1-211ENST00000581761 RGPD4Q7Z3J3 1758 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 GRM8O00222 908 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 A1BGP04217 495 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 KCNQ4P56696 695 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 BMP2KLQ5H9B9 411 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
MKS1-211ENST00000581761 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
MKS1-211ENST00000581761 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
MKS1-211ENST00000581761 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
MKS1-211ENST00000581761 IBTKQ9P2D0 1353 aaPredicted RBP18.12■□□□□ 0.49
MKS1-211ENST00000581761 NEURL1BA8MQ27 555 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 MSH5O43196 834 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 SEC24BO95487 1268 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 DNAJC10Q8IXB1 793 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
MKS1-211ENST00000581761 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 UTYO14607 1347 aa18.11■□□□□ 0.49
MKS1-211ENST00000581761 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
MKS1-211ENST00000581761 OTUD7AQ8TE49 926 aaPredicted RBP18.1■□□□□ 0.49
MKS1-211ENST00000581761 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
MKS1-211ENST00000581761 LRRCC1Q9C099 1032 aa18.1■□□□□ 0.49
MKS1-211ENST00000581761 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
MKS1-211ENST00000581761 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
MKS1-211ENST00000581761 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
MKS1-211ENST00000581761 GCKRQ14397 625 aa18.09■□□□□ 0.49
MKS1-211ENST00000581761 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
MKS1-211ENST00000581761 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
MKS1-211ENST00000581761 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
MKS1-211ENST00000581761 RAB11FIP3O75154 756 aa18.08■□□□□ 0.48
MKS1-211ENST00000581761 SURF6O75683 361 aaKnown RBP18.08■□□□□ 0.48
MKS1-211ENST00000581761 MTX1Q13505 466 aa18.08■□□□□ 0.48
MKS1-211ENST00000581761 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
MKS1-211ENST00000581761 LRP5O75197 1615 aa18.08■□□□□ 0.48
MKS1-211ENST00000581761 STARD3NLO95772 234 aa18.07■□□□□ 0.48
MKS1-211ENST00000581761 HSP90AB4PQ58FF6 505 aa18.06■□□□□ 0.48
MKS1-211ENST00000581761 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
MKS1-211ENST00000581761 LY75O60449 1722 aa18.06■□□□□ 0.48
MKS1-211ENST00000581761 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
MKS1-211ENST00000581761 GSPT1P15170 499 aaKnown RBP18.05■□□□□ 0.48
MKS1-211ENST00000581761 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
MKS1-211ENST00000581761 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
MKS1-211ENST00000581761 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
MKS1-211ENST00000581761 CDC45O75419 566 aa18.04■□□□□ 0.48
MKS1-211ENST00000581761 OS9Q13438 667 aaPredicted RBP18.04■□□□□ 0.48
MKS1-211ENST00000581761 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
MKS1-211ENST00000581761 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
MKS1-211ENST00000581761 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
MKS1-211ENST00000581761 SLC4A9Q96Q91 983 aa18.04■□□□□ 0.48
MKS1-211ENST00000581761 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
MKS1-211ENST00000581761 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
MKS1-211ENST00000581761 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
MKS1-211ENST00000581761 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
MKS1-211ENST00000581761 PDE1AP54750 535 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms