RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 AK7Q96M32 723 aa11.42□□□□□ -0.58
CDK5RAP3-221ENST00000581662 PALLDQ8WX93 1383 aa11.41□□□□□ -0.58
CDK5RAP3-221ENST00000581662 SBF1O95248 1867 aa11.41□□□□□ -0.58
CDK5RAP3-221ENST00000581662 MCOLN1Q9GZU1 580 aa11.41□□□□□ -0.58
CDK5RAP3-221ENST00000581662 THSD7BQ9C0I4 1608 aa11.41□□□□□ -0.58
CDK5RAP3-221ENST00000581662 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-221ENST00000581662 E2F4Q16254 413 aa11.4□□□□□ -0.58
CDK5RAP3-221ENST00000581662 FBXW7Q969H0 707 aa11.4□□□□□ -0.58
CDK5RAP3-221ENST00000581662 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-221ENST00000581662 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
CDK5RAP3-221ENST00000581662 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 RASSF7Q02833 373 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 DALRD3Q5D0E6 543 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 ANKRD24Q8TF21 1146 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 DDX12PQ92771 950 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
CDK5RAP3-221ENST00000581662 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
CDK5RAP3-221ENST00000581662 EPAS1Q99814 870 aa11.37□□□□□ -0.59
CDK5RAP3-221ENST00000581662 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
CDK5RAP3-221ENST00000581662 LTBP1Q14766 1721 aa11.37□□□□□ -0.59
CDK5RAP3-221ENST00000581662 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 TIAM2Q8IVF5 1701 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 LMNB1P20700 586 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 CABP1Q9NZU7 370 aa11.36□□□□□ -0.59
CDK5RAP3-221ENST00000581662 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
CDK5RAP3-221ENST00000581662 MEGF6O75095 1541 aa11.35□□□□□ -0.59
CDK5RAP3-221ENST00000581662 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-221ENST00000581662 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-221ENST00000581662 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
CDK5RAP3-221ENST00000581662 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-221ENST00000581662 LINC00116Q8NCU8 138 aa11.34□□□□□ -0.59
CDK5RAP3-221ENST00000581662 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
CDK5RAP3-221ENST00000581662 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-221ENST00000581662 ITGBL1O95965 494 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-221ENST00000581662 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-221ENST00000581662 ZCRB1Q8TBF4 217 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-221ENST00000581662 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
CDK5RAP3-221ENST00000581662 COL9A1P20849 921 aa11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 HABP4Q5JVS0 413 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-221ENST00000581662 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 GNPATO15228 680 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 SOX10P56693 466 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 NBR1Q14596 966 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 PDIA6Q15084 440 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
CDK5RAP3-221ENST00000581662 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
CDK5RAP3-221ENST00000581662 TMF1P82094 1093 aa11.3□□□□□ -0.6
CDK5RAP3-221ENST00000581662 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
CDK5RAP3-221ENST00000581662 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
CDK5RAP3-221ENST00000581662 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
CDK5RAP3-221ENST00000581662 LTN1O94822 1766 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 BHMG1C9JSJ3 638 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 NFKBIEO00221 500 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 DLL1O00548 723 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 GYS1P13807 737 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 CHRNA5P30532 468 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 PTPN5P54829 565 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 DGKZQ13574 1117 aa11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-221ENST00000581662 MAP3K7O43318 606 aa11.28□□□□□ -0.6
CDK5RAP3-221ENST00000581662 ITPK1Q13572 414 aa11.28□□□□□ -0.6
CDK5RAP3-221ENST00000581662 BEGAINQ9BUH8 593 aa11.28□□□□□ -0.6
CDK5RAP3-221ENST00000581662 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
CDK5RAP3-221ENST00000581662 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 LOC102724428A0A0B4J2F2 783 aa11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 SIK1P57059 783 aa11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 WNT2BQ93097 391 aa11.27□□□□□ -0.61
CDK5RAP3-221ENST00000581662 MPRIPQ6WCQ1 1025 aa11.26□□□□□ -0.61
CDK5RAP3-221ENST00000581662 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ADAMTS7Q9UKP4 1686 aa11.26□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CAPNS2Q96L46 248 aa11.25□□□□□ -0.61
CDK5RAP3-221ENST00000581662 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
CDK5RAP3-221ENST00000581662 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CA12O43570 354 aa11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 DDR1Q08345 913 aa11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 IP6K1Q92551 441 aa11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-221ENST00000581662 DDNO94850 711 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 DCAF11Q8TEB1 546 aa11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 PIGBQ92521 554 aa11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 GPR101Q96P66 508 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
CDK5RAP3-221ENST00000581662 CD163L1Q9NR16 1453 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms