RNA–Protein interactions for RNA: ENST00000581448.5

PLEKHM1-207, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 1 (best)

Gene PLEKHM1, Length 3,292 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-207ENST00000581448 TYRO3Q06418 890 aa15.6■□□□□ 0.09
PLEKHM1-207ENST00000581448 CDC37L1Q7L3B6 337 aa15.6■□□□□ 0.09
PLEKHM1-207ENST00000581448 ATP6V1DQ9Y5K8 247 aa15.6■□□□□ 0.09
PLEKHM1-207ENST00000581448 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
PLEKHM1-207ENST00000581448 GNAI3P08754 354 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 TTC6Q86TZ1 520 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 OSBPL3Q9H4L5 887 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 ROBO2Q9HCK4 1378 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 ANAPC15P60006 121 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 TMEM2Q9UHN6 1383 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 RGS12O14924 1447 aa15.59■□□□□ 0.09
PLEKHM1-207ENST00000581448 PRR36Q9H6K5 1346 aa15.58■□□□□ 0.09
PLEKHM1-207ENST00000581448 LETM1O95202 739 aaPredicted RBP15.58■□□□□ 0.09
PLEKHM1-207ENST00000581448 NCBP1Q09161 790 aaKnown RBP15.58■□□□□ 0.09
PLEKHM1-207ENST00000581448 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.09
PLEKHM1-207ENST00000581448 MTMR6Q9Y217 621 aa15.58■□□□□ 0.09
PLEKHM1-207ENST00000581448 SPTLC3Q9NUV7 552 aa15.58■□□□□ 0.08
PLEKHM1-207ENST00000581448 SPATA31D1Q6ZQQ2 1576 aa15.58■□□□□ 0.08
PLEKHM1-207ENST00000581448 ME3Q16798 604 aa15.58■□□□□ 0.08
PLEKHM1-207ENST00000581448 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
PLEKHM1-207ENST00000581448 AMOTL2Q9Y2J4 779 aa15.58■□□□□ 0.08
PLEKHM1-207ENST00000581448 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 CBX8Q9HC52 389 aa15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 ST7Q9NRC1 585 aa15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 PA2G4Q9UQ80 394 aaKnown RBP15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 CNTROBQ8N137 903 aa15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 GTPBP4Q9BZE4 634 aaKnown RBP15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 CLIP2Q9UDT6 1046 aa15.57■□□□□ 0.08
PLEKHM1-207ENST00000581448 SGSM2O43147 1006 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 AMPHP49418 695 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 UTP14CQ5TAP6 766 aaKnown RBP15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 GORABQ5T7V8 394 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 SPATA32Q96LK8 384 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 USP44Q9H0E7 712 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 CYP46A1Q9Y6A2 500 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 SIL1Q9H173 461 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 MRVI1Q9Y6F6 885 aa15.56■□□□□ 0.08
PLEKHM1-207ENST00000581448 USP27XA6NNY8 438 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 RAB11FIP3O75154 756 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.089e-7■■■■■ 27.6
PLEKHM1-207ENST00000581448 KRT85P78386 507 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 LRRC2Q9BYS8 371 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 ZNF165P49910 485 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 NGDNQ8NEJ9 315 aaKnown RBP15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 LSG1Q9H089 658 aaKnown RBP15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 HYPKQ9NX55 129 aa15.55■□□□□ 0.08
PLEKHM1-207ENST00000581448 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 TAF7Q15545 349 aaPredicted RBP15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 CCDC144BQ3MJ40 725 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 CCDC144CPQ8IYA2 1237 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 CACTINQ8WUQ7 758 aaKnown RBP15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 ACEP12821 1306 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 RAD50Q92878 1312 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 NR1I2O75469 434 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 USP16Q9Y5T5 823 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 USP32Q8NFA0 1604 aa15.54■□□□□ 0.08
PLEKHM1-207ENST00000581448 HSP90B1P14625 803 aaKnown RBP15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 TPCN1Q9ULQ1 816 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 NDUFB9Q9Y6M9 179 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 GOLGA6L19H0YKK7 550 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 FGD1P98174 961 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 ZSCAN25Q6NSZ9 544 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 LARP1Q6PKG0 1096 aaKnown RBP15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 FUCA2Q9BTY2 467 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 TAF6LQ9Y6J9 622 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 TTC14Q96N46 770 aa15.53■□□□□ 0.08
PLEKHM1-207ENST00000581448 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
PLEKHM1-207ENST00000581448 ZKSCAN1P17029 563 aaPredicted RBP15.52■□□□□ 0.07
PLEKHM1-207ENST00000581448 GUCY1B3Q02153 619 aa15.52■□□□□ 0.07
PLEKHM1-207ENST00000581448 CEP135Q66GS9 1140 aa15.52■□□□□ 0.07
PLEKHM1-207ENST00000581448 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.07
PLEKHM1-207ENST00000581448 ZNF215Q9UL58 517 aaPredicted RBP15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 BECN2A8MW95 431 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 IFIT2P09913 472 aaKnown RBP15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 PI4K2BQ8TCG2 481 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 BOLA2Q9H3K6 86 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 JAK2O60674 1132 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 ELF2Q15723 593 aa15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 EDC3Q96F86 508 aaKnown RBP15.51■□□□□ 0.07
PLEKHM1-207ENST00000581448 KIF24Q5T7B8 1368 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 H3BQV1 296 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 KIF20AO95235 890 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 IFFO2Q5TF58 517 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 REREQ9P2R6 1566 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 ZNF75DP51815 510 aa15.5■□□□□ 0.07
PLEKHM1-207ENST00000581448 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms