RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 DCAF5Q96JK2 942 aa8.92□□□□□ -0.98
SMCHD1-205ENST00000581383 TXLNAP40222 546 aa8.91□□□□□ -0.98
SMCHD1-205ENST00000581383 TNP2Q05952 138 aa8.91□□□□□ -0.98
SMCHD1-205ENST00000581383 NDFIP2Q9NV92 336 aa8.91□□□□□ -0.98
SMCHD1-205ENST00000581383 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
SMCHD1-205ENST00000581383 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
SMCHD1-205ENST00000581383 TEAD4Q15561 434 aa8.9□□□□□ -0.98
SMCHD1-205ENST00000581383 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
SMCHD1-205ENST00000581383 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
SMCHD1-205ENST00000581383 RASA1P20936 1047 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 ALAS2P22557 587 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 PCBP4P57723 403 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 NEUROD1Q13562 356 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 BTBD6Q96KE9 485 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 HCN4Q9Y3Q4 1203 aa8.89□□□□□ -0.99
SMCHD1-205ENST00000581383 K7ELQ4 463 aaPredicted RBP8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 FAM157BP0CG42 384 aa8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 EPXP11678 715 aa8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 HINFPQ9BQA5 517 aa8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
SMCHD1-205ENST00000581383 GNB5O14775 395 aa8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 ITGB2P05107 769 aa8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 CLDN10P78369 228 aa8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 ZDHHC1Q8WTX9 485 aa8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 NOP53Q9NZM5 478 aaKnown RBP8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
SMCHD1-205ENST00000581383 PROCP04070 461 aa8.86□□□□□ -0.99
SMCHD1-205ENST00000581383 CHSY3Q70JA7 882 aa8.86□□□□□ -0.99
SMCHD1-205ENST00000581383 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
SMCHD1-205ENST00000581383 UCN2Q96RP3 112 aa8.86□□□□□ -0.99
SMCHD1-205ENST00000581383 KIAA1024Q9UPX6 916 aa8.86□□□□□ -0.99
SMCHD1-205ENST00000581383 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 LAMC2Q13753 1193 aa8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 LCE3BQ5TA77 95 aa8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 SAMD5Q5TGI4 173 aa8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 TSEN2Q8NCE0 465 aaKnown RBP8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 NGLY1Q96IV0 654 aa8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
SMCHD1-205ENST00000581383 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 ZNF468Q5VIY5 522 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 GPC6Q9Y625 555 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-205ENST00000581383 EML1O00423 815 aa8.83□□□□□ -1
SMCHD1-205ENST00000581383 SEC13P55735 322 aa8.83□□□□□ -1
SMCHD1-205ENST00000581383 SH3PXD2AQ5TCZ1 1133 aa8.83□□□□□ -1
SMCHD1-205ENST00000581383 STRN4Q9NRL3 753 aa8.83□□□□□ -1
SMCHD1-205ENST00000581383 EPHA4P54764 986 aa8.82□□□□□ -1
SMCHD1-205ENST00000581383 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
SMCHD1-205ENST00000581383 SCG3Q8WXD2 468 aaKnown RBP8.82□□□□□ -1
SMCHD1-205ENST00000581383 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
SMCHD1-205ENST00000581383 M0R2N6 131 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 RFX1P22670 979 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 HIF1AQ16665 826 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 SIX5Q8N196 739 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 BRD7Q9NPI1 651 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 ATAD2Q6PL18 1390 aa8.81□□□□□ -1
SMCHD1-205ENST00000581383 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
SMCHD1-205ENST00000581383 LMOD1P29536 600 aaPredicted RBP8.8□□□□□ -1
SMCHD1-205ENST00000581383 SFSWAPQ12872 951 aaKnown RBP8.8□□□□□ -1
SMCHD1-205ENST00000581383 VTI1AQ96AJ9 217 aa8.8□□□□□ -1
SMCHD1-205ENST00000581383 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
SMCHD1-205ENST00000581383 SUV39H2Q9H5I1 410 aa8.8□□□□□ -1
SMCHD1-205ENST00000581383 IGFLR1Q9H665 355 aa8.8□□□□□ -1
SMCHD1-205ENST00000581383 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
SMCHD1-205ENST00000581383 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
SMCHD1-205ENST00000581383 ELOA3DA6NLF2 546 aaPredicted RBP8.79□□□□□ -1
SMCHD1-205ENST00000581383 EFSO43281 561 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 SPEM2Q0P670 501 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 ELOA3BQ3SY89 546 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 LINC00114Q6XXX2 140 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
SMCHD1-205ENST00000581383 ALDH16A1Q8IZ83 802 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 ELOA3Q8NG57 546 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 VRTNQ9H8Y1 702 aa8.79□□□□□ -1
SMCHD1-205ENST00000581383 KRBA1A5PL33 1030 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 LGR5O75473 907 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 DGKGP49619 791 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 SUSD3Q96L08 255 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 PNMA5Q96PV4 448 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 KLF15Q9UIH9 416 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
SMCHD1-205ENST00000581383 COL8A1P27658 744 aa8.77□□□□□ -1.01
SMCHD1-205ENST00000581383 GAS2L2Q8NHY3 880 aa8.77□□□□□ -1.01
SMCHD1-205ENST00000581383 BHMTQ93088 406 aa8.77□□□□□ -1.01
SMCHD1-205ENST00000581383 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
SMCHD1-205ENST00000581383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms